Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2708 ATGAGAACAGAGTCGAGGAAGATATCCAAGTCTTCGTGGGCGAAATTATCCATGAGGAAGTGGCTTCATATAAAGAGCTTTGCTGATAAATCTCACTCAGACTTTAATGAACTGGGCACTCACAGAGAAAGGAGGAAGAGCTGTTCAGATATAAAAGAGTGTTACGTCGTCGTGCCGGAGGCTTTCTCAGAGGGGTGGTTGTTGGAAGCTGAGGATGGAGGGAAACAATATTCCGTACTGGAGAAGCAAGCAGCAGTTGTAATGGAGAAGAAACTCAACCTTAGGATGTTCGTGGGGACGTGGAATGTAGGAGGGAAGTCACCTTATGAAGGCCTGAATTTGAGGGATTGGCTTTCCCTGGATTCTCCTTCCCCAGCTGACATCTATGTCATTGGGTTCCAAGAGATCGTGCCTCTGAATGCGGGGAATGTGCTGGGGCCAGAAGACTGTGGGCCCGCATCAAAGTGGCTGACTCTGATTGGTGAGACCTTAAACTCCGACAACGAGTTTGACTCCGATTTGAAGCCGAGCTCCAGTTTCTGTGGCATACTCTCTTTAGATCAGCAGCCTCCTTATTTCCTAGCCGCAAGCAAACAGATGGTCGGAATCTTCTTGTGCGTGTGGGTGCGATCCCATCTTCTTCAACATGTCACCAGCTTAAATGTCTCATGCATTGGCCGCGGCATTATGGGCTGTCTAGGAAACAAGGGTTCGATTTCTATTAGCATGACATTGCACGGCACCACGTTCTGTTTTGTTTGTACCCACTTGGCCTCCGGCGAGAAAGATGGCGACGAAGTAAGAAGAAACTTGGACGTCTCTGAAATCTTGAAGAAGACTAAATTTTCGTCCTCTTTCAAAGCTCTTGGTCACTCACTCTCTCCTGGAAGCATATTGGAGCATGATAAGATTATTTGGCTTGGGGATTTGAATTATCGGTTAGCTACTGGTTATGCCGATACCCACGAGTTATTGAAGAAGAACGATTGGTCAGCATTATTAGAGAAGGATCAGCTAAGGATAGAACAAAGATCTGGTCGAGTGTTTCAAGGCTGGAATGAAGGGAAAATATATTTTGCTCCCACTTATAAATACTTAGCCAATTCTGACCACTATGTTGTCCGAACCTCGAAATCCAAGGAAAAACATCGGACTCCTGCGTGGTGCGACCGGATTCTGTGGAAAGGGGAAGGGCTAAAGCAGATGTGGTACGAGAGAGGAGAGTGCAGATTCTCGGACCACAGGCCAGTCTATTCGCTGTTCTCAGTTCAAGTGGATACGACAGCCAAGAATAATGTCACTGCAAAACCCAACAATAATGCTGCTGCATTGTCGTCTACCTGCACCGCTAAAGTTCAGGCAGAGGAGCAGCTCTTGTTACTCACAAGGGTCCAGAGTTGCATACACAGCGCACGCAGGTTATGA 1425 0.4709 MRTESRKISKSSWAKLSMRKWLHIKSFADKSHSDFNELGTHRERRKSCSDIKECYVVVPEAFSEGWLLEAEDGGKQYSVLEKQAAVVMEKKLNLRMFVGTWNVGGKSPYEGLNLRDWLSLDSPSPADIYVIGFQEIVPLNAGNVLGPEDCGPASKWLTLIGETLNSDNEFDSDLKPSSSFCGILSLDQQPPYFLAASKQMVGIFLCVWVRSHLLQHVTSLNVSCIGRGIMGCLGNKGSISISMTLHGTTFCFVCTHLASGEKDGDEVRRNLDVSEILKKTKFSSSFKALGHSLSPGSILEHDKIIWLGDLNYRLATGYADTHELLKKNDWSALLEKDQLRIEQRSGRVFQGWNEGKIYFAPTYKYLANSDHYVVRTSKSKEKHRTPAWCDRILWKGEGLKQMWYERGECRFSDHRPVYSLFSVQVDTTAKNNVTAKPNNNAAALSSTCTAKVQAEEQLLLLTRVQSCIHSARRL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2708 474 Gene3D Endonuclease/exonuclease/phosphatase 76 450 IPR036691 -
Alju03g2708 474 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 439 IPR045849 GO:0004445
Alju03g2708 474 SMART i5p_5 92 429 IPR000300 GO:0016791|GO:0046856
Alju03g2708 474 Pfam Endonuclease/Exonuclease/phosphatase family 99 414 IPR005135 GO:0003824
Alju03g2708 474 SUPERFAMILY DNase I-like 92 427 IPR036691 -
Alju03g2708 474 FunFam Type I inositol polyphosphate 5-phosphatase 8 75 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2708 Alju-ChrAlju03 53018132 53022527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2708 67 425 Acyl Lipid Metabolism Gene Families AT1G65580 30.120 2.72e-40 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1614 01 13012625 13017900 Alju03g2708 03 53018132 53022527 CCT
Alju03g2708 03 53018132 53022527 Alju03g2708 03 53018132 53022527 ECH