Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2654 ATGGGGTCACTAGAAAGATCAAAGAAGGGAATTCATTTGTGGAAGAAAGCCATGATCCATTTCTCTCTATGTTTCGTGATGGGTTTCTTCACAGGCTTTGCTCCAACAGGTAAATCTTCTTTCGTTTTGACACAATCACCTTCTGCCTCCAATGGAACAACAGAAATTGCACCACGAGCTTTTGAAACGTCACACGACCAGACAAATGTGAATAGAAGCTTGAAGTCTCCGAGTTCTAGGATCCCAAAACACAAGACAGAGTCACATGTACAAGAAGATCAACCCAGTTTGAAGCCTAGAAAACACATAATCATTGTCACTCCAACGAGCAACAGAATCCCCTTTCAAGCAGTGTTATTGAGGAGGTTGGCGAATACTATAAAGTTGGTTCCTCAGCCATTGTTGTGGATTGTGGTGGAACCATCAACGGTGTCCACAGAACTTTCGGAGATACTAAGGAAAACAGGAATCATGTACAGACATTTGGTGTCCAAGGAAAACTTCACAGACCTAGAAGCTGAGCTGAATCATCAGAGAAATCTTGCTCTCAAGCACATCGAACACCATAAACTAAGTGGGATTGTTCACTTTGCTGGCCTTTCCAATGCTTATGACCTCGAATTCTTTCACCAGCTTAGAGATATCGAGGTATTTGGAACATGGCCAGTGGCGTTATTAGCAGCTAACAGGAAGAAAGTAATAATAGAAGGGCCAGTGTGTGATTCTTCACAAGTCATTGGTTGGCATCTCAAGAATTTCGACAATGATTCTGTTTCTACGACTAATCCTCCCATTCACATTTCGAGTTTTGCATTCAATAGTTCCATTCTTTGGGACCCTGAGAGGTGGGGTCGCACTTCTTCCGTTCAAGACACATCTCAGAATTCAATCAAAATTGTGAAGCAAGTGGTATTGGAAGATGAATCAAAGTTAAGTGGAATTTCACCAGAGGGATGCTCCAGAATCATGCTATGGCGTTTCAATTTTCAGCCTCCTGTCACCTCAAGATATCAAATTTTAACATCTACGCCAAATGGTAGCCCCAGATGA 1050 0.4219 MGSLERSKKGIHLWKKAMIHFSLCFVMGFFTGFAPTGKSSFVLTQSPSASNGTTEIAPRAFETSHDQTNVNRSLKSPSSRIPKHKTESHVQEDQPSLKPRKHIIIVTPTSNRIPFQAVLLRRLANTIKLVPQPLLWIVVEPSTVSTELSEILRKTGIMYRHLVSKENFTDLEAELNHQRNLALKHIEHHKLSGIVHFAGLSNAYDLEFFHQLRDIEVFGTWPVALLAANRKKVIIEGPVCDSSQVIGWHLKNFDNDSVSTTNPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKIVKQVVLEDESKLSGISPEGCSRIMLWRFNFQPPVTSRYQILTSTPNGSPR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2654 349 CDD GlcAT-I 103 331 IPR005027 GO:0015018|GO:0016020
Alju03g2654 349 Pfam Glycosyltransferase family 43 123 328 IPR005027 GO:0015018|GO:0016020
Alju03g2654 349 FunFam Glycosyltransferases 101 342 - -
Alju03g2654 349 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 335 IPR005027 GO:0015018|GO:0016020
Alju03g2654 349 MobiDBLite consensus disorder prediction 60 77 - -
Alju03g2654 349 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 102 345 IPR029044 -
Alju03g2654 349 MobiDBLite consensus disorder prediction 80 95 - -
Alju03g2654 349 SUPERFAMILY Nucleotide-diphospho-sugar transferases 102 340 IPR029044 -
Alju03g2654 349 MobiDBLite consensus disorder prediction 60 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2654 Alju-ChrAlju03 52672796 52674689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2654 1 329 Glycosyltransferase AT2G37090 60.000 5.29e-144 409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1546 01 12434359 12435915 Alju03g2654 03 52672796 52674689 CCT
Alju03g2654 03 52672796 52674689 Alju03g2654 03 52672796 52674689 ECH