Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2269 ATGACGGTGACACCTGATATATTCATCAACGATGGGAACTTGGTGGTCCATGGAAAGACCATTCTGAAAGATGTACCAGACAACATTGTGCTCACTCCTGAGCTTGGGGATGGGCTTGTTTCTGGTGCATTTCTTGGCGCCACTTCTTCGAAGTCCAAAAGCTTCCATGTGTTTCCTCTGGGTGTCCTTGAGTATGTCTTCTTTCCCCATCTTTATTCTTCATTTTTGGACTCAACTCTTAAAGCAGTTCTTTTCTGTCTTGTTATAATGGGAACTTGTGGGAAAGACGTGCCTCTGGAGACCCAATTCATGCTGGTGGAAACCAGAGAAGAACATTCTAGAGCCATCTACACAGTGTTGCTTCCTCTGCTGGAAGGCCAGTTCCGTGCTGTTCTACAGGGTTGGAGATCTGCCTTGAGAGTGCTACCATCTTTTCTTGACTGGTTTGGTTGGTGCACTTGGGATGCTTTCTATACCGATGTCAATGCTGAGGGTGTTGAGGAAGGCCTCAAAAGCCTATCAGAAGGAGGTACATCTCCAAGGTTCCTCATCATAGATGATGGTTGGCAACAGATTGAAAGCAAATCAAATGACTCTGATTCGGTCATACAAGAAGGAGCTCAGTTGGCTAGCAGATTGATTGGCATAAAAGAGAATACTAAATTTAAAAAACGTGGACCCAACAATGAACCAAACTCTGGCCTGAAACATGTTGTAGAAGAATCAAAACACCTCCACAATGTTAAATACGTACATGTATGGCATGCTCTGGCTGGATATTGGGGAGGAGTGAAGCCAGCGGCAAGTGGCATGGAAAAGTACGAGACAGCCTTGGCATACCCTGTACAATGTCATGGTATACTAGGTAACCCATCGGACATCGTCATGGACAGCTTGTCCGTACATGGCTTAGGATTAGTACACCCAAAGAAGGGTTTCGATTTCTACAATGAGCTTCATGCATACTTAGCTTCGTGCGGAGTAGATGGAGTCAAAGTGGATGTACAGAACATAATTGAAACGCTAGGCTCTGGTTATGGAGGCAGAGTGTCCCTCACGCGCAGCTATGTCCAGGCACTTGAGGCCTCCATTGCTCTGAACTTTACTGATAATGGCTGCATTGCCTGA 1128 0.4566 MTVTPDIFINDGNLVVHGKTILKDVPDNIVLTPELGDGLVSGAFLGATSSKSKSFHVFPLGVLEYVFFPHLYSSFLDSTLKAVLFCLVIMGTCGKDVPLETQFMLVETREEHSRAIYTVLLPLLEGQFRAVLQGWRSALRVLPSFLDWFGWCTWDAFYTDVNAEGVEEGLKSLSEGGTSPRFLIIDDGWQQIESKSNDSDSVIQEGAQLASRLIGIKENTKFKKRGPNNEPNSGLKHVVEESKHLHNVKYVHVWHALAGYWGGVKPAASGMEKYETALAYPVQCHGILGNPSDIVMDSLSVHGLGLVHPKKGFDFYNELHAYLASCGVDGVKVDVQNIIETLGSGYGGRVSLTRSYVQALEASIALNFTDNGCIA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2269 375 Pfam Raffinose synthase or seed imbibition protein Sip1 9 134 IPR008811 -
Alju03g2269 375 Pfam Raffinose synthase or seed imbibition protein Sip1 141 375 IPR008811 -
Alju03g2269 375 Gene3D Aldolase class I 148 373 IPR013785 -
Alju03g2269 375 PANTHER - 1 134 IPR008811 -
Alju03g2269 375 SUPERFAMILY (Trans)glycosidases 145 375 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2269 Alju-ChrAlju03 49609395 49611390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2269 1 375 Glycoside Hydrolase AT3G57520 58.430 2.49e-171 488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1120 01 8639684 8643022 Alju03g2269 03 49609395 49611390 CCT
Alju03g2269 03 49609395 49611390 Alju03g2269 03 49609395 49611390 ECH