Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1261 ATGGGGTTTCATGGGTCTACATCTTTGATGGCTGATACGGGATTAGTGGATTTAAGGTTGGGTAATCTTATGAGGATTTCACCTTTCAAAAGGTTTGAAAGAACTGATAAGGTAACAGAAGCCTTTCACTTTGTGGCAATGGCAATGAGCTTTCAGTATAGTTCTTTTGGACAGCTAAGAGTTCCTGATTTCAACTCTGAAGTTCTGTTGATTGTTGGTGTTAATCGGTCTCCATTGGCAGCAGATAGACTCTTTCTTGTGTCTGAAGACTCAGCTGTATTGGGCAAATCTCCTTTGGCAAAAGTTACTCTTTCTAGCTTCTCATTGATGGAAATGCACATTATGGACTCAGACTGGGAGACTTTCAGTGAGAGCAGCAGCAGTGAGGATCAAGAGGAAATTGATTTTCTATATGCTGGGCAAGCTCGGAGCATACTATCCAGTTTAGAGGAAAGCATTGGGAAAATTGATGATTTCCTTTCATTTGAAAAAGCATTTGTTCACGGGGATGTGGTTTGTTCCTTGTCAGATCCATCTGGACAGATGGGCAGGGTTACAGGTGTTGATATGTTTGTGGATTTGGAAAGTGTTCATGGAAAATTATTAAAAAACGTAAACTCCAAGAGGCTTTTGAAAATTCGCTCCATTTCAGAAGGTGATTTTGTGATTAAGGGGCCATGGCTTGGAAGAGTTCAAAAGGTAGTGGACAAAGTAACTGTATTATTTGATGATGGAGCAAAATGTGAGGTCACCACATTGGAAAGAGATAAGATCTTGCCTCTGACTCGTAATTTGCTTGAAGACTTACAGTATCCATTTTATCCAGGGCAGAGAGTAAAGGTTAATTCCTCATCTTCTTCTAAGTCAGCTAGATGGTTATGTGGAACTTGGAGAGACAGTGAAGATGAAGGAACTGTTTGTTATGTTGAGGCAGGTCTAGTGTGTGTTAACTGGCTCATATTTGTTCCCGTGGATCCTGATTTTCCGGTAAATGCTCCCCCACGCTGGCAGGATTCCAAAAAGTTGACCTTGCTCTCATGTTTTTCACATGCAAACTGGCAGCTTGGTGACTGGTGCATGCTTGCAGTGGCAGACCAAAAGGAACAGATGGAACAGAATTTCGGAAATACATCTACCGGGGGTCTAACTAAGGAGAACATTATGACAAGAGGATATAAAAATGGAAACGTTCACTTCAATATTGGGGAACTTTTTGTAATTGGGAAAATAAGGACCAAAGTTGATATTGTATGGCAGGATGGTGAACAGACTTTGGGAATCGATCCCCATACTCTACTCCCAGTGAATGTCATAGACACCCATGAATTTTGGCCTCAGCAGTATGTGTTGGAAAAAGGTGCTTCTGATGATCATCCTAAGCCCAGCTGTCAAAGATGGGGAGTTGTTCTGTCTGTGGATGCAAAAGAGCGTACTGTAAAGGTACAATGGAATACTGTTTCCGTATCCATGCCAGAGAATTTGGCTGGAGATAGGATGGAGGAAACTGTGAGTGCCTATGAACTCTTAGAGCACCCAGACTACTCCTGTTGTTTCGGTGATATTGTATTCAAGGCGGCTCAAAAACAGCTTGGTTACCAAGCTGAGAAAGATCAAGCAAAGTCAGCAACTGGTGACTTGAATGTGGAGGCTGCTCTTATGGAAAGGAACCACATCAGTTATCAGAACGAGTTCCCTGATAACTGTTACCTGTCCCGCATTGGCAACGTTGTTGGTTTCAAGGATGGTGCTGTAGAGGTGAAATGGGCTACTGGTTTAACAACCAAGGTTGCACCTCATGAAATTTTTCGAATTGATAAGCATGAAGGTTCAACTGAAACCCCTGTTCCAAATGAGGCAGATATTGAGGAGTTGACTCAAGAGATGACTGAGAATGGAAATCTAACTTCTGACAAAAAGGGAAAGGGCTTGTTAGATTTTGATGGTGATAGAGTGAACTGTGAAAGGCATCGAGGGGAATCTAGTACCTTTTCCCTTCCTCGAGCTGCGATTGAAATTTTCTCCACCATTAAGGCTGGCATTTTTCAGACTTTTGGTGTAACATCAATTTCACCAGGAGTTTCTTTAGTCCCCACAACTGAAGAGGAAAATCAGTCTGAAAATCTTAGTAAGAAAGAAGTTTCAGAAACTTGTGAACTCCGCACTGAAGCAAATCCGATGAGTGAATTGCAATCTACTGAAGACTTGACTCCAGATCAGGATGTTATTAGATTTTCTGAGAGGAAAGATCTTCCATTTTCTTCAAATAGCAACAATTCAGATGGGTTTAACCAGTTTGATATAATAGATAATTGTTCAGACCACCACTTCTTTGATGTGCAAAAAGGGTTGGCATTATCTCAGGTAAAAAGAGGATGGGTGAAAAAGATTCAACAAGAATGGAGCATCCTAGAGAGAAATCTTCCAGAAACTATTTATGTCCGTGTGTTTGAAGAAAGAATGGATCTCCTGCGAGCAGCTATTGTTGGTGCACCTGGAACTCCTTATCATGATGGCTTATTCTTCTTTGATGTTTGTTTCCCTCCAGAGTATCCTAATGAACCACCTATGGTGCACTACCTTTCGGGTGGTCTCAGATTAAACCCTAATCTGTATGAATCGGGAAATGTCTGTCTGAGCCTCCTGAATACGTGGACCGGTACAGGCAGTGAAATGTGGAACCCAGGGGCCTCCACAACCCTTCAAGTCCTTCTCTCTCTGCAGGCCCTTGTCCTTAATGAAAAGCCTTATTTCAATGAGGCTGGATATGACCAGCAGATTGGCAGAGCCGAAGGAGAGAAGAACTCAGTGAGCTACAATGAAAATGCTTTCCTCGTCACCTGCAAATCAATGCTTTATCTACTGAGAAAGCCACCCAAGCATTTTGAGTTACTCGTGGAAGAGCACTTCAGCCAACGCGCGCAACACATACTTGTCGCTTGTAAGGCCTATAGCGAAGGAGCTGCCATTGGATGTGCTTTTGACTGTGGAAAAGCCATGCACCAAAATCAGAAGGGAACTTCTACAGGTTTCAAAATCATGCTTGCTAAGCTCTTCCCCAAGCTCGTCGAGGCTTTTTCTGGTAAGGGAATTGATTGCAGTCAGTTTGTTCAGTTGGAGAATGTTGTGTTGTGTTGTGTTGTGTTGTGTATTTGTGGGGGTTGGGGTTTGTGTTGTTTGATGTTGTGA 3186 0.4247 MGFHGSTSLMADTGLVDLRLGNLMRISPFKRFERTDKVTEAFHFVAMAMSFQYSSFGQLRVPDFNSEVLLIVGVNRSPLAADRLFLVSEDSAVLGKSPLAKVTLSSFSLMEMHIMDSDWETFSESSSSEDQEEIDFLYAGQARSILSSLEESIGKIDDFLSFEKAFVHGDVVCSLSDPSGQMGRVTGVDMFVDLESVHGKLLKNVNSKRLLKIRSISEGDFVIKGPWLGRVQKVVDKVTVLFDDGAKCEVTTLERDKILPLTRNLLEDLQYPFYPGQRVKVNSSSSSKSARWLCGTWRDSEDEGTVCYVEAGLVCVNWLIFVPVDPDFPVNAPPRWQDSKKLTLLSCFSHANWQLGDWCMLAVADQKEQMEQNFGNTSTGGLTKENIMTRGYKNGNVHFNIGELFVIGKIRTKVDIVWQDGEQTLGIDPHTLLPVNVIDTHEFWPQQYVLEKGASDDHPKPSCQRWGVVLSVDAKERTVKVQWNTVSVSMPENLAGDRMEETVSAYELLEHPDYSCCFGDIVFKAAQKQLGYQAEKDQAKSATGDLNVEAALMERNHISYQNEFPDNCYLSRIGNVVGFKDGAVEVKWATGLTTKVAPHEIFRIDKHEGSTETPVPNEADIEELTQEMTENGNLTSDKKGKGLLDFDGDRVNCERHRGESSTFSLPRAAIEIFSTIKAGIFQTFGVTSISPGVSLVPTTEEENQSENLSKKEVSETCELRTEANPMSELQSTEDLTPDQDVIRFSERKDLPFSSNSNNSDGFNQFDIIDNCSDHHFFDVQKGLALSQVKRGWVKKIQQEWSILERNLPETIYVRVFEERMDLLRAAIVGAPGTPYHDGLFFFDVCFPPEYPNEPPMVHYLSGGLRLNPNLYESGNVCLSLLNTWTGTGSEMWNPGASTTLQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLVTCKSMLYLLRKPPKHFELLVEEHFSQRAQHILVACKAYSEGAAIGCAFDCGKAMHQNQKGTSTGFKIMLAKLFPKLVEAFSGKGIDCSQFVQLENVVLCCVVLCICGGWGLCCLML 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1261 1061 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 791 951 IPR000608 -
Alju03g1261 1061 CDD UBCc 793 946 IPR000608 -
Alju03g1261 1061 Pfam Ubiquitin-conjugating enzyme 796 942 IPR000608 -
Alju03g1261 1061 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 112 1032 - -
Alju03g1261 1061 FunFam Probable ubiquitin-conjugating enzyme E2 23 753 1029 - -
Alju03g1261 1061 SMART ubc_7 794 951 - -
Alju03g1261 1061 SUPERFAMILY UBC-like 785 960 IPR016135 -
Alju03g1261 1061 Gene3D Ubiquitin Conjugating Enzyme 754 1032 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1261 Alju-ChrAlju03 41110972 41118544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1261 130 1034 Miscellaneous Gene Families AT2G33770 49.725 0.0 894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1261 03 41110972 41118544 Alju03g1261 03 41110972 41118544 ECH