Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1200 ATGGGATTGCATGCAAAAATTTGGTACAACGTTGCTAGGCCCGCATGCGACGTGTTCATCAACCACCGTACGGTCGATACGAGACGATCGGTGGTTCGTTTGTTGTACAACCATCTGACGCAGCAAGGATGCAAGCCGTTCTTGGACGCAGAAAACCTGAGACCAGGAGATAGGTTGTTGGACACTATTGACAAGGCTATACGAGGATGTAATGTTGGGGTTGCTGTGTTTTCGCCTCGTTATTGTGACTCCTATTACTGTCTCCATGAGCTCTCACTCATCATGGAATCAAAGAAACGAATCGTTCCTATTTTCTATGATGTGAAGCCGTCGCAACTTCGGATTGTGGACAGTGGAATATTGAGTTGTTCACAGAAAGATCTCAAGAGGTTTAATTTGGCTATTGAAGAAGCTAAAAGCATTGTGGGGCTGCCCTTCGATTCCTCGAAAGATGATTGGTCAGAGCTGGTACGTAAAGCTTCAAATGCAGTGATGAGCAAATTGCATGAAGAAAGCAGTGCATGA 525 0.4533 MGLHAKIWYNVARPACDVFINHRTVDTRRSVVRLLYNHLTQQGCKPFLDAENLRPGDRLLDTIDKAIRGCNVGVAVFSPRYCDSYYCLHELSLIMESKKRIVPIFYDVKPSQLRIVDSGILSCSQKDLKRFNLAIEEAKSIVGLPFDSSKDDWSELVRKASNAVMSKLHEESSA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1200 174 SMART till_3 15 163 IPR000157 GO:0007165
Alju03g1200 174 ProSiteProfiles TIR domain profile. 14 164 IPR000157 GO:0007165
Alju03g1200 174 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 162 - -
Alju03g1200 174 Pfam TIR domain 17 169 IPR000157 GO:0007165
Alju03g1200 174 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 114 IPR035897 -
Alju03g1200 174 Gene3D - 11 173 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1200 Alju-ChrAlju03 40457138 40458604 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1200 11 164 Miscellaneous Gene Families AT1G57670 27.108 1.34e-14 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1203 03 40532387 40533833 Alju03g1200 03 40457138 40458604 CCT
Alju03g1200 03 40457138 40458604 Alju03g1200 03 40457138 40458604 ECH