Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1071 ATGGCACGTAACTCTATCTTCATCCCATTATCACTTCTTCTCCTTGTCGTCTTGGCCATCACACAGATCTCCGACGCTCAAGACTCACCGCAAGACTACGTCAACGCCCACAACGCCGCCCGCCGCCAAGTCGGCGTCGGAAACATTCAGTGGGACCCAAAGCTGGCCAACTACGCCAGAAACTACCTGAGCAAGTATAAGGACAGCTGCCAGATGGTCCACTCCGGCGGCCCCTACGGCGAGAACCTCGCCTGGGGCAAACCTGACCTGACCGGCACCGCCGCAGTCAAGATGTGGGTTGATGAGAAGCGGTACTACGATTATAAATCCAACTCGTGCATCGGAGGCCAAGAGTGCAGGCACTACACTCAGGTGGTTTGGCGTAAATCGGTTCGGGTCGGATGTGCGAAGATGAAGTGTAACCACAACCGTGGCACTCTTATCAGCTGCAACTACGAGCCTCGTGGGAATATAATTGGTCAGCGTCCTTATGATAATCCTCTCTTTGAAGTTCCACTCAGCTTTCCAGAAAGTGCTTAA 540 0.5352 MARNSIFIPLSLLLLVVLAITQISDAQDSPQDYVNAHNAARRQVGVGNIQWDPKLANYARNYLSKYKDSCQMVHSGGPYGENLAWGKPDLTGTAAVKMWVDEKRYYDYKSNSCIGGQECRHYTQVVWRKSVRVGCAKMKCNHNRGTLISCNYEPRGNIIGQRPYDNPLFEVPLSFPESA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1071 179 FunFam Putative pathogenesis-related protein 1 27 164 - -
Alju03g1071 179 CDD CAP_PR-1 30 164 - -
Alju03g1071 179 Gene3D CAP 23 170 IPR035940 -
Alju03g1071 179 Pfam Cysteine-rich secretory protein family 34 152 IPR014044 -
Alju03g1071 179 SUPERFAMILY PR-1-like 16 164 IPR035940 -
Alju03g1071 179 ProSitePatterns CRISP family signature 1. 120 130 IPR018244 GO:0005576
Alju03g1071 179 PRINTS Allergen V5/Tpx-1 family signature 119 135 IPR001283 -
Alju03g1071 179 PRINTS Allergen V5/Tpx-1 family signature 95 108 IPR001283 -
Alju03g1071 179 PRINTS Allergen V5/Tpx-1 family signature 49 67 IPR001283 -
Alju03g1071 179 PRINTS Allergen V5/Tpx-1 family signature 147 160 IPR001283 -
Alju03g1071 179 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 28 165 IPR001283 -
Alju03g1071 179 SMART SCP_3 28 160 IPR014044 -
Alju03g1071 179 ProSitePatterns CRISP family signature 2. 147 158 IPR018244 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1071 Alju-ChrAlju03 38592605 38593144 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1071 03 38592605 38593144 Alju03g1071 03 38592605 38593144 CCT
Alju03g1071 03 38592605 38593144 Alju03g1071 03 38592605 38593144 ECH