Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g1070 | ATGAGGTCCTCGTCATCAAACCTTAACAAAGTTCTGGCCATCTTCGTCGTCGTGTGTTTATTCACCATCTCGTTTGCCGTCGTAGCTCACGCTCAGGCTGAAGTAGATCAACAGGATGACCCACCTCAAGAACTACAGGACCCGTCTCAAGAACAGGACCCATCAGCAGAGCCCCAGGCACCAGCTAGATCTGGCAGCACTCCTCAAGCATGGCTGGATGCACACAACGAGGCACGGGCGGAGGTAGGCGTGCCGCCGTTGGTGTGGAACGAGAGCCTGGTGGAATATGCTCAGAATTACGCGGACTCAAGGTATGAGAAGTGCGAGTTCGAGCACTCTATGGGTCCGTACGGCGAGAACCTGGCGATGAACTACGACGACATGGAAGGCACCGACACCGTCAAGTTCTGGTGCACCGAGAAGAAGGACTACGACCACGCCACCAACACTTGCATCACCGGTGAGTGGGAGTGTGGACACTACACTCAAGTGGTTGCACGCAGGACCACATCTGTTGGCTGTGCTAAGGCTAAGTGCAAGAACAACTGGATGTTCGTCATTTGTAGCTATTACCCTCCGGGCAACATTATAGGCGAGAACCCTTACTGA | 609 | 0.5402 | MRSSSSNLNKVLAIFVVVCLFTISFAVVAHAQAEVDQQDDPPQELQDPSQEQDPSAEPQAPARSGSTPQAWLDAHNEARAEVGVPPLVWNESLVEYAQNYADSRYEKCEFEHSMGPYGENLAMNYDDMEGTDTVKFWCTEKKDYDHATNTCITGEWECGHYTQVVARRTTSVGCAKAKCKNNWMFVICSYYPPGNIIGENPY | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g1070 | 202 | CDD | CAP_PR-1 | 68 | 202 | - | - | |
| Alju03g1070 | 202 | SMART | SCP_3 | 66 | 198 | IPR014044 | - | |
| Alju03g1070 | 202 | SUPERFAMILY | PR-1-like | 55 | 202 | IPR035940 | - | |
| Alju03g1070 | 202 | FunFam | CAP, cysteine-rich secretory protein, antigen 5 | 65 | 202 | - | - | |
| Alju03g1070 | 202 | PANTHER | CYSTEINE-RICH SECRETORY PROTEIN-RELATED | 66 | 199 | IPR001283 | - | |
| Alju03g1070 | 202 | ProSitePatterns | CRISP family signature 2. | 185 | 196 | IPR018244 | GO:0005576 | |
| Alju03g1070 | 202 | MobiDBLite | consensus disorder prediction | 42 | 68 | - | - | |
| Alju03g1070 | 202 | PRINTS | Allergen V5/Tpx-1 family signature | 185 | 198 | IPR001283 | - | |
| Alju03g1070 | 202 | PRINTS | Allergen V5/Tpx-1 family signature | 158 | 174 | IPR001283 | - | |
| Alju03g1070 | 202 | PRINTS | Allergen V5/Tpx-1 family signature | 87 | 105 | IPR001283 | - | |
| Alju03g1070 | 202 | PRINTS | Allergen V5/Tpx-1 family signature | 133 | 146 | IPR001283 | - | |
| Alju03g1070 | 202 | Gene3D | CAP | 62 | 202 | IPR035940 | - | |
| Alju03g1070 | 202 | MobiDBLite | consensus disorder prediction | 35 | 68 | - | - | |
| Alju03g1070 | 202 | Pfam | Cysteine-rich secretory protein family | 72 | 190 | IPR014044 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju03g1070 | Alju-ChrAlju03 | 38547720 | 38549613 | Tandem |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Alju03g1070 | 03 | 38547720 | 38549613 | Alju03g1070 | 03 | 38547720 | 38549613 | ECH |