Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1056 ATGTTTCTCTTAACCACCCTCTATAGTAGCCTATGCAAATTAGATCTATTAATACAAGTTCCTTGTAGAAGGGAAAAAGGAATCCTCTACACGTCACTTAATCGGCCACTTCAGTTGAAAAGAGGAGAGGGCGGAGCTGGGGATGTTATGAACGGAAGCTTCTGCGACGCCCCAATAGATTCTAAAGTCCCCCCCCCCCCCAAACAAGCAATAAACGCGCAAATGGCTTCGTCGGAGATCGAGGTGGTGTCATCGGACTCTAAAACTCCGAAAGTTTCAGATGCACCTCAAGTAGTAGACATGTTTTCTGCCTGTTTTTGTGGGGACTTAGAGAAATTGAGGTGGTTTGTGGAACAAGAAGGTGCCTCCGTTTCTGTTCCTGATTCCAATGGCTATTATGCTCTCCAATGGGCATCCCTTAATAACTTTCCAGATATTGTGCAGTATGTCATTAAGCACGGGGGCGATGTCAATGCTACTGACCACATGCAACAAACGGCACTACACTGGGCGGCAGTTCGTGGTGCAACTACGGTGGCTGATTTGCTCTTGGAGAACGGTGCCCGGCTTGAGGCTGCTGATATATATGGATACAGGGCAGTTCATGTTGCTGCTCAACATGGACAAACAGCTTTCTTAAATCACATCATTGCAAAGTATAATGCTGATTTTGATGCACCCGATAATGAGGGACGAAGTCCTCTACATTGGGCTGCCTATAAGGGGTTTACTGATACAATCCGATTGCTTCTATTCCGGGATGCATGCCAAGGGAGACAAGATAAAGATGGTTGTACGCCATTGCACTGGGCTGCATTAAGAGGAAATGCAGAGGCATGCACTGTGCTTGTACACTCAGGCACAAAGAAAGAACTGGTGGTGAAGGACAAAGCTGGATTTACTCCTGTACAACTTGCACATGATAAAGGTCATCGGCATGTCACCCTTTTCCTTTCTAATCAACAGAGAGCTCTGAGCAACCGCTGGAGAGACAAAATTTGTAGTGGGAGGATGACAGATATTGGTTATGCTCCCATTTTATTTTGTATTATAATCTTTGAAATGTTCCTCTTCGTGAACTCAGTTGTTGCAGGTTCTAGCTTTCAAAAGATTACTGCTGGTGTTGGCCTTTGGGCTTGGACTGCTCTTTCTCTGGCAGTTGGTTCCTTGATTATGTTCTATAGGTGCAGTAGTAAGGATCCTGGTTATATAAAACGACCGGGAGATTCAGGTGCTCATGGTGATGCAGAGGATCCTTTATTGAATATTGACGTGAACAGCTCCTCTGTTTGGACAGGAAATTGGTCTCAACTTTGCCCAACCTGCAAGATAATAAGAGCTGTCCGATCTAAGCATTGCCCTACTTGTAAGCGTTGTGTGGAACAATTTGACCATCATTGCCCATGGATATCTAACTGTGTGGGAAAGAGGAACAAAAGGGATTTCTTTATTTTTGTTTGCATGGCAACTTTGACATCATTCTTTAGCGGTGCTGTTACGGTTCAAAGAATTTGGACATCATCACTAGGATTGTCAGAAGGAGAAACATGGATCCATCATATGTTAGTACTGCATCCTGGTGCTATTGCATTTCTGGTGCTGGACACTTTTATATTCATTGCTGCTGTAACTTTGACATCAACACAGGCTTCCATGATAGCTCGGAATATCACCACAAATGAAGTGGCAAACTCTACTCGATATGTGTATCTTCGCGGTCCTGATGGGAAGTTTAGAAATCCATACAACCATGGCTGTTGGAAGAATTGTTCTGACTTCTTTTTTCTGGGCTATACAAATGATGATGACATTGCTTGGCCTCCATTGCAGCGGGTGAGCGGGAACGTAGAATAA 1854 0.4428 MFLLTTLYSSLCKLDLLIQVPCRREKGILYTSLNRPLQLKRGEGGAGDVMNGSFCDAPIDSKVPPPPKQAINAQMASSEIEVVSSDSKTPKVSDAPQVVDMFSACFCGDLEKLRWFVEQEGASVSVPDSNGYYALQWASLNNFPDIVQYVIKHGGDVNATDHMQQTALHWAAVRGATTVADLLLENGARLEAADIYGYRAVHVAAQHGQTAFLNHIIAKYNADFDAPDNEGRSPLHWAAYKGFTDTIRLLLFRDACQGRQDKDGCTPLHWAALRGNAEACTVLVHSGTKKELVVKDKAGFTPVQLAHDKGHRHVTLFLSNQQRALSNRWRDKICSGRMTDIGYAPILFCIIIFEMFLFVNSVVAGSSFQKITAGVGLWAWTALSLAVGSLIMFYRCSSKDPGYIKRPGDSGAHGDAEDPLLNIDVNSSSVWTGNWSQLCPTCKIIRAVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFVCMATLTSFFSGAVTVQRIWTSSLGLSEGETWIHHMLVLHPGAIAFLVLDTFIFIAAVTLTSTQASMIARNITTNEVANSTRYVYLRGPDGKFRNPYNHGCWKNCSDFFFLGYTNDDDIAWPPLQRVSGNVE 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1056 617 ProSiteProfiles Ankyrin repeat profile. 230 262 IPR002110 GO:0005515
Alju03g1056 617 ProSiteProfiles Ankyrin repeat region circular profile. 130 161 - -
Alju03g1056 617 SMART ANK_2a 130 159 IPR002110 GO:0005515
Alju03g1056 617 SMART ANK_2a 196 226 IPR002110 GO:0005515
Alju03g1056 617 SMART ANK_2a 230 259 IPR002110 GO:0005515
Alju03g1056 617 SMART ANK_2a 263 292 IPR002110 GO:0005515
Alju03g1056 617 SMART ANK_2a 163 192 IPR002110 GO:0005515
Alju03g1056 617 ProSiteProfiles Ankyrin repeat region circular profile. 163 194 - -
Alju03g1056 617 ProSiteProfiles Ankyrin repeat region circular profile. 263 287 - -
Alju03g1056 617 Pfam Ankyrin repeats (3 copies) 103 193 IPR002110 GO:0005515
Alju03g1056 617 Pfam Ankyrin repeats (3 copies) 202 290 IPR002110 GO:0005515
Alju03g1056 617 Gene3D - 268 320 IPR036770 -
Alju03g1056 617 FunFam S-acyltransferase 217 325 - -
Alju03g1056 617 ProSiteProfiles Ankyrin repeat profile. 163 195 IPR002110 GO:0005515
Alju03g1056 617 FunFam S-acyltransferase 85 216 - -
Alju03g1056 617 ProSiteProfiles Ankyrin repeat profile. 130 162 IPR002110 GO:0005515
Alju03g1056 617 ProSiteProfiles DHHC domain profile. 437 487 - -
Alju03g1056 617 Pfam DHHC palmitoyltransferase 437 564 IPR001594 GO:0016409
Alju03g1056 617 SUPERFAMILY Ankyrin repeat 102 320 IPR036770 -
Alju03g1056 617 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 100 600 - -
Alju03g1056 617 ProSiteProfiles Ankyrin repeat profile. 196 229 IPR002110 GO:0005515
Alju03g1056 617 Gene3D - 99 202 IPR036770 -
Alju03g1056 617 ProSiteProfiles Ankyrin repeat profile. 263 295 IPR002110 GO:0005515
Alju03g1056 617 ProSiteProfiles Ankyrin repeat region circular profile. 230 251 - -
Alju03g1056 617 Gene3D - 203 267 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1056 Alju-ChrAlju03 38340114 38352558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1056 201 321 Miscellaneous Gene Families AT5G02620 25.781 4.46e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1056 03 38340114 38352558 Alju03g1056 03 38340114 38352558 ECH