Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2682 ATGGAGGCTTTGGTGTCATTGTGCCTAATACTTCCTTTTTTGTATTCTTTCTTCACCCTTTTTAACATGATCCTTCGACGGAGAGGCCAGAGCTGCTACATGCTGGCCTACGAGTGCTTCATGCCGCCGGAGGACACGAAGTTGGACACTGACTCCGCCGTGAGGATCGTGCTGAGGAACAAGAAGTTAGGGCTTGAGGAGTACAGGTTTCTGCTCAAAACCATGGTGAGCTCAGGCATAGGAGAGAACACTTACTGCCCTAGGAACGTCTTAGAAGGACGAGAGGAGTTTCCGACCCTCGACGATTCCTACGCCGAGATCGACGAGATCATGTTTGACACTCTCGATGGACTCTTCAAAAAGACTCAGTTTTCTCCCTCAGACATTGACATCCTTGTGGTTAACGTGTCTTTGTTCTCTCCTGCACCTTCCCTCACAGCCCGTATTATAAACAGGTACAAAATGAGGGAGGACATCAAGGCGATTAACTTGGCCGGAATGGGGTGTTCGGCGAGCGTGGTCGCCATCGACGTGGTGCAGCGGATGTTCCAGTGCCATCCAAACTCTCTGGCCGTAGTCGTGAGCACCGAAGATCTTGGTGCTCACTGGTACTGCGGCAACAACAAGATGATGATGCTCTCAAACTGTCTCTTCCGCTCCGGTGGCTGCTCCATGCTCTTCACCAACAAGTCCTCCCTCAAGCACCGTGCCATCTTGAAGCTCAAACACATGGAAAGAACCCAGTTTGGTGCAAATGATGAAGCCTATGGCTGCTGCATGCAGGTTGAAGACGAACTTGGGTACCAAGGGTTCCAACTCACAAAGAGTCTTGTAAAATCTGCAGCACAAGCCTTAACTGTGAACTTACAGACTATGGTCCCAAAGATTCTCCCTCTTTGGGAACTCATTCGCTTTCTCTCAGCTTCTCTGCATCAAAGTAGCAAAACAAAGAAAGCACTAACATTCAACGTACTAGGAGGTGGTTTGAATTTAAAGTCAGGAATAGACCACTTCTGTGTCCACCCCGGAGGCCGAGCCGTGATCGACGGTGTCGGTAAAGGTCTAGGGCTCACAGAGTACGACCTCGAACCGGCGAGAATGGCGCTTCACCGATGGGGCAACACTTCTGCAGGTGGACTCTGGTACGTTTTAGGGTACATGGAGGCCAAGAAGAGGCTTAAGAAAGGTGATAAGATCTTAATGATAAGCCTTGGTGCTGGGTTTAAGTGTAATAACTGTGCTTGGGAGGTCATGAAGGATTTAGAAAACCCTAATGCTTGGAAAGATTGCATTGATAGTTATCCTCCAAGGACTCTGAAGAATCCTTTCAAGGAAAAGTACAATTGGATCCATGATGAGATTCTTAACTTTGTGAGGTTCGATACGACTAGGCTCTCCGTCAACTAA 1407 0.4861 MEALVSLCLILPFLYSFFTLFNMILRRRGQSCYMLAYECFMPPEDTKLDTDSAVRIVLRNKKLGLEEYRFLLKTMVSSGIGENTYCPRNVLEGREEFPTLDDSYAEIDEIMFDTLDGLFKKTQFSPSDIDILVVNVSLFSPAPSLTARIINRYKMREDIKAINLAGMGCSASVVAIDVVQRMFQCHPNSLAVVVSTEDLGAHWYCGNNKMMMLSNCLFRSGGCSMLFTNKSSLKHRAILKLKHMERTQFGANDEAYGCCMQVEDELGYQGFQLTKSLVKSAAQALTVNLQTMVPKILPLWELIRFLSASLHQSSKTKKALTFNVLGGGLNLKSGIDHFCVHPGGRAVIDGVGKGLGLTEYDLEPARMALHRWGNTSAGGLWYVLGYMEAKKRLKKGDKILMISLGAGFKCNNCAWEVMKDLENPNAWKDCIDSYPPRTLKNPFKEKYNWIHDEILNFVRFDTTRLSVN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2682 468 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 449 IPR012392 GO:0006633|GO:0016020|GO:0016747
Alju02g2682 468 SUPERFAMILY Thiolase-like 21 233 IPR016039 GO:0016746
Alju02g2682 468 CDD CHS_like 11 415 - -
Alju02g2682 468 PANTHER 3-KETOACYL-COA SYNTHASE 15 436 IPR012392 GO:0006633|GO:0016020|GO:0016747
Alju02g2682 468 Gene3D - 66 416 IPR016039 GO:0016746
Alju02g2682 468 Pfam FAE1/Type III polyketide synthase-like protein 25 310 IPR013601 GO:0006633|GO:0016020|GO:0016747
Alju02g2682 468 SUPERFAMILY Thiolase-like 243 417 IPR016039 GO:0016746
Alju02g2682 468 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 333 415 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2682 Alju-ChrAlju02 32651658 32656002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2682 18 461 Acyl Lipid Metabolism Gene Families AT5G04530 62.361 0.0 600
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2682 02 32651658 32656002 Alju10g0215 10 1623596 1625017 CCT
Alju02g2682 02 32651658 32656002 Alju02g2682 02 32651658 32656002 ECH