Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2010 ATGGAACTTTTTGAGTTAAGGTGCTTGCAATTGATTCGCTTCTTCTTTTGGGCACCTGAACTCTCTGGTTCGCCAATGGCTTCCTCTTGTGTGACCTGGAAAGGCAATACTTACTTACCAGGAAAGGGAGATTTCTTTCGCCGTGATAATGGGTTTTTAGGAGAAAGAATCAAGAACCCGAGTTGCATCAGTCCCTTCGTGAATCCGTCGACTTCAAGTTTGAGACACGAGAAGAGGGTCAAGAAGATCAAACCTGGCGTTGTTTTTTCTGTTCTTACATCAAATGATACCAAAGAAGCTCTGGTTGACTACCAGACCTTACAGGTTCCTTCGTTTCTGAGACGAAAGGCTGACCCCAAAAATGTAATTTCAATCATATTAGGTGGAGGACCTGGACTTCAACTCTTTCCCCTCACCAAGCGAGCTGCAACACCTGCTGTACCCGTTGGTGGATGCTACAGACTTATAGACATCCCAATGAGCAACTGTATCAACAGCGGCCTGAACAAAATCTTTGTACTCACCCAATTCAACTCTGCATCTCTGAACCGTCATATCTCACGCACCTACTTTGGAAACAGCTTCGGGGATGGATTTGTAGAGGTTCTAGCAGCCACTCAGACACCCGGAGAAGCAGGGAAGAGGTGGTTCCAAGGGACTGCAGATGCTGTGAGGCAATTTACATGGGTATTTGAGGACGCCAAGAACACAAACGTTGAGAATGTATTGATCTTGGCAGGAGATCATCTATATAGAATGGATTACATGGACCTTGTGCAGAGCCATGTTGACAGAAATGCTGATATTACAGTTTCATGCGCACCAGTAGGTGACAGCCGTGCCTCAGACTATGGATTGGTCAAGGTAGATGGAAGAGGCCGCATCAACCAATTTTTGGAAAAACCAAAGGGCGCTGATTTGAAAGCAATGCAAGTAGATACCTCTTTTATCGGGTTGTCACACCAAGACGCATTAAAGTCACCATATATAGCATCCATGGGGGTTTATGTATTTAAGACAGATGTCCTGCTCAAGCTTTTGAAATGGAGATATCCTACATCCAATGACTTTGGATCTGAAATCATTCCTGCAGCTGTGAGGGAACACAATGTCCAATCATATATTTTCAGAGACTACTGGGAAGACATTGGAACAATAAAGTCCTTTTACGATGCCAACCTTGCTCTTACTGAAGAGAATCCAAGCTTTGAATTTTATGATCCCAAAACACCCATTTTCACATCTCCTAGTTTCCTACCACCAACGAAGATTGACAAGTGTCAGATTGTGGATGCGATCATCTCACATGGATGTTTCCTTCGAGAATGCACAGTCCGGCGCTCCATTGTGGGCGAACGTTCTCGTTTGGATTATGGGGCTGAGCTCCTGGACACTGTAATGATGGGAGCAGACTATTACCAAACTGAATCTGAAATCGCTTCTCTGCAAGCGGAAGGGAAGGTCCCAATCGGGATTGGGAGCAATACAAAAATCAAGAACTGTATAATTGACAAGAATGCAAGGATTGGGAGAGATGTGATGATCATCAATAAAGATGGAGTTGAAGAAGCAGATAGACCAGAGGATGGGTTTTACATTCGATCAGGGATCACTGTCATCATGGAGAAGGCCACCATAGAAGATGGCACTGTGATATGA 1659 0.4442 MELFELRCLQLIRFFFWAPELSGSPMASSCVTWKGNTYLPGKGDFFRRDNGFLGERIKNPSCISPFVNPSTSSLRHEKRVKKIKPGVVFSVLTSNDTKEALVDYQTLQVPSFLRRKADPKNVISIILGGGPGLQLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGLNKIFVLTQFNSASLNRHISRTYFGNSFGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFTWVFEDAKNTNVENVLILAGDHLYRMDYMDLVQSHVDRNADITVSCAPVGDSRASDYGLVKVDGRGRINQFLEKPKGADLKAMQVDTSFIGLSHQDALKSPYIASMGVYVFKTDVLLKLLKWRYPTSNDFGSEIIPAAVREHNVQSYIFRDYWEDIGTIKSFYDANLALTEENPSFEFYDPKTPIFTSPSFLPPTKIDKCQIVDAIISHGCFLRECTVRRSIVGERSRLDYGAELLDTVMMGADYYQTESEIASLQAEGKVPIGIGSNTKIKNCIIDKNARIGRDVMIINKDGVEEADRPEDGFYIRSGITVIMEKATIEDGTVI 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2010 552 Pfam Nucleotidyl transferase 124 398 IPR005835 GO:0009058
Alju02g2010 552 CDD ADP_Glucose_PP 125 383 - -
Alju02g2010 552 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 331 341 IPR005836 GO:0005978|GO:0008878
Alju02g2010 552 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 216 224 IPR005836 GO:0005978|GO:0008878
Alju02g2010 552 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 70 552 IPR011831 GO:0005978|GO:0008878
Alju02g2010 552 SUPERFAMILY Nucleotide-diphospho-sugar transferases 120 513 IPR029044 -
Alju02g2010 552 CDD LbH_G1P_AT_C 420 546 - -
Alju02g2010 552 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 108 417 IPR029044 -
Alju02g2010 552 Gene3D Hexapeptide repeat proteins 418 552 - -
Alju02g2010 552 FunFam Glucose-1-phosphate adenylyltransferase 104 417 - -
Alju02g2010 552 SUPERFAMILY Trimeric LpxA-like enzymes 415 552 IPR011004 -
Alju02g2010 552 NCBIfam glucose-1-phosphate adenylyltransferase 122 516 IPR011831 GO:0005978|GO:0008878
Alju02g2010 552 FunFam Glucose-1-phosphate adenylyltransferase 418 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2010 Alju-ChrAlju02 19417188 19422180 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2010 02 19417188 19422180 Alju02g2010 02 19417188 19422180 ECH