Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1983 ATGGCCAGTGATTCTGCAGTAATGTCCAACGGCAATGCCAACTCACATCCTGATCCTCAGAGGAATTACCAGGTGGTTGTAGCTGCAACCCGGGATATGGGTATTGGTAAGGATGGAAAACTACCCTGGAGACTGCCTGGTGATCTCAAATTTTTTAAGGAGATCACTTCAATGACATCTGATCCTGGGAAGAAGAATGCAGTGATAATGGGTAGAAAAACATGGGAGAGTATCCCTCTGGAGAATCGCCCTCTTCCTGGTCGCCTTAATGTTGTTCTTACTCGCTCAGGAAGCTTCGACATTGCAACTGCAGAGAATGTTGTTATATGTGGAAGCATGTCCTCCGCATTGGAATTGTTAGCTGCATCTCCTTACTGTCTATCAATTGAAAAAGTGTTTGTTATAGGAGGTGGCCAGATATTTAGAGAGGCTCTAAATGCACCTGCATGTGAAGCTGTTCAAATTACTGAAATTGAGACAAATATTGAGTGTGATACTTTCATGCCTCCAATTGATTCCTCTGTATTTCAGCCATGGTACTCTTCCTTTCCTAGGGTGGAGAACAACGTCCGCTATTGTTTTACCACATATGTACGAGTTAGGAGTTCTATAACAGAATCCCTGAGTCAGAATTCTGATCAAATTTGTGATACTAGATCAGATTCCTCTAAATTTGAGGTCAAGAACTTCTCTTTTCTTCCTAAAATGATTTTTGAGAGACATGAGGAGAATATTTATCTCAATCTGGTCCAAGAAATCATCTCTGAAGGCACTGCTAAGGATGATAGGACTGGGACTGGCACCTTCTCGAAATTTGGTTGCCAGATGAGGTTTAATTTGCGCAGAAGCTTTCCTCTTTTAACAACTAAGAAAGTATTTTGGCGAGCGGTTGTTGAAGAGCTTCTCTGGTTTATAAGTGGTTCAACAAATGCGAAGGTGCTGCAGGAAAAAGGCATCCATATATGGGATGGCAATGCATCCCGGGAATACCTCGATAGTGTTGGATTGTCAGAGAGGGAGGAGGGTGACTTGGGACCTGTTTATGGGTTCCAGTGGAGGCACTTTGGTGCCAAGTATACTGACATGCATGCTGACTACTCTGGCAAAGGATTTGATCAACTTTTAGATGTCATTAACAAGATCAAGCATAATCCTGATGATCGGCGGATTATTCTCTCAGCTTGGAATCCAGTAGATCTTAAATTGATGGCCCTTCCACCCTGCCACATGTTTGCACAGTTCTATGTAGCAAATGGGGAGTTATCTTGTCAAATGTATCAGCGATCTGCAGACATGGGACTGGGCGTGCCCTTTAATATTGCATCCTATGCTCTCCTGACATGCATGATTGCTCAAGTTTGTGATCTTGTTCCTGGTGATTTTGTCCATGTTATTGGGGATGCACACGTTTACCGCAATCACGTGCGACCTTTGCAGGAGCAGCTCCGGAACCTTCCTAAACCTTTTCCTATTTTGAAGATAAGTCCAAAGAAGGATATAGATTCTTTTGTGGCTTCTGATGTCAAACTGATAGGCTATGATCCTTACCAGAAGATAGAAATGAAGATGGCTGTGTAA 1578 0.429 MASDSAVMSNGNANSHPDPQRNYQVVVAATRDMGIGKDGKLPWRLPGDLKFFKEITSMTSDPGKKNAVIMGRKTWESIPLENRPLPGRLNVVLTRSGSFDIATAENVVICGSMSSALELLAASPYCLSIEKVFVIGGGQIFREALNAPACEAVQITEIETNIECDTFMPPIDSSVFQPWYSSFPRVENNVRYCFTTYVRVRSSITESLSQNSDQICDTRSDSSKFEVKNFSFLPKMIFERHEENIYLNLVQEIISEGTAKDDRTGTGTFSKFGCQMRFNLRRSFPLLTTKKVFWRAVVEELLWFISGSTNAKVLQEKGIHIWDGNASREYLDSVGLSEREEGDLGPVYGFQWRHFGAKYTDMHADYSGKGFDQLLDVINKIKHNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAQVCDLVPGDFVHVIGDAHVYRNHVRPLQEQLRNLPKPFPILKISPKKDIDSFVASDVKLIGYDPYQKIEMKMAV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1983 525 ProSitePatterns Dihydrofolate reductase (DHFR) domain signature. 34 56 IPR017925 GO:0004146
Alju02g1983 525 CDD DHFR 26 198 IPR001796 GO:0004146|GO:0046654
Alju02g1983 525 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 223 525 IPR036926 -
Alju02g1983 525 NCBIfam thymidylate synthase 245 525 IPR000398 GO:0004799|GO:0006231
Alju02g1983 525 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 22 199 IPR001796 GO:0004146|GO:0046654
Alju02g1983 525 PANTHER THYMIDYLATE SYNTHASE 1 46 525 IPR045097 GO:0016741
Alju02g1983 525 ProSitePatterns Thymidylate synthase active site. 388 416 IPR020940 GO:0004799|GO:0006231
Alju02g1983 525 Hamap Thymidylate synthase [thyA]. 243 525 IPR000398 GO:0004799|GO:0006231
Alju02g1983 525 MobiDBLite consensus disorder prediction 1 21 - -
Alju02g1983 525 CDD TS_Pyrimidine_HMase 245 479 IPR023451 -
Alju02g1983 525 FunFam Possible thymidylate synthase 237 525 - -
Alju02g1983 525 SUPERFAMILY Dihydrofolate reductase-like 21 199 IPR024072 -
Alju02g1983 525 Gene3D Dihydrofolate Reductase, subunit A 4 201 IPR024072 -
Alju02g1983 525 Pfam Thymidylate synthase 245 525 IPR023451 -
Alju02g1983 525 FunFam Bifunctional dihydrofolate reductase-thymidylate synthase 5 200 - -
Alju02g1983 525 PRINTS Thymidylate synthase family signature 284 305 IPR000398 GO:0004799|GO:0006231
Alju02g1983 525 PRINTS Thymidylate synthase family signature 459 476 IPR000398 GO:0004799|GO:0006231
Alju02g1983 525 PRINTS Thymidylate synthase family signature 421 447 IPR000398 GO:0004799|GO:0006231
Alju02g1983 525 PRINTS Thymidylate synthase family signature 403 418 IPR000398 GO:0004799|GO:0006231
Alju02g1983 525 PRINTS Thymidylate synthase family signature 377 396 IPR000398 GO:0004799|GO:0006231
Alju02g1983 525 Pfam Dihydrofolate reductase 24 199 IPR001796 GO:0004146|GO:0046654
Alju02g1983 525 PIRSF DHFR-TS 5 525 IPR012262 GO:0004146|GO:0004799|GO:0006730
Alju02g1983 525 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 232 525 IPR036926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1983 Alju-ChrAlju02 19140873 19144354 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1983 02 19140873 19144354 Alju02g1983 02 19140873 19144354 ECH