Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1894 ATGAAACTTCCCTTCTTCCTTCTCTCCTTTCTCCTCTTGATCCTCATTCCCTCTGCAGTTCACGCCACCACTTTCACATTCGTCAACCGATGTCGCTACACCGTCTGGCCAGGAATCCTAGCTAATGCCGGCAGCGGAAGCCTCGACACTACCGGATTCGAGCTCCCCAAAGATACTTCCCGCTCTTTCCTTGCTCCCACCGGCTGGTCCGGCCGCTTCTGGGCTCGAACCGGCTGTAATTTCGACGGATCCGGCACCTGTGTCACAGGCGACTGTGGCTCTGGTCAGCTCGAGTGCAACGGCAACGGAGCATCGCCGCCTGTCACTCTCGCCGAGTTAAAAATTACTAATATTGTCGCCGCTATAACTTCAACTGGTAAATAA 384 0.5443 MKLPFFLLSFLLLILIPSAVHATTFTFVNRCRYTVWPGILANAGSGSLDTTGFELPKDTSRSFLAPTGWSGRFWARTGCNFDGSGTCVTGDCGSGQLECNGNGASPPVTLAELKITNIVAAITSTGK 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1894 127 ProSiteProfiles Thaumatin family profile. 22 115 IPR001938 -
Alju02g1894 127 PIRSF PR5 1 121 IPR001938 -
Alju02g1894 127 Pfam Thaumatin family 29 117 IPR001938 -
Alju02g1894 127 Gene3D Thaumatin 23 123 IPR037176 -
Alju02g1894 127 SUPERFAMILY Osmotin, thaumatin-like protein 23 115 IPR037176 -
Alju02g1894 127 ProSitePatterns Thaumatin family signature. 83 99 IPR017949 -
Alju02g1894 127 SMART tha2 25 127 IPR001938 -
Alju02g1894 127 PANTHER OS03G0233200 PROTEIN 10 115 IPR001938 -
Alju02g1894 127 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Alju02g1894 127 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1894 Alju-ChrAlju02 18186655 18187120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1894 6 115 Receptor kinase-like Gene Family AT5G38280 44.348 1.09e-27 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1894 02 18186655 18187120 Alju02g1894 02 18186655 18187120 ECH