Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1879 ATGGGAAGCAATTGCTCCATGGCTCCAGCAATTACTGTATTTATGGCTCATGAGCATCAAAACGTATACTGTAGAGCTGTCAGCAACTTCATATACTTGGAGAAGGGAGTGTACATCGCCCGTGATATTTTCAGAAGGAATGGGACACGATGTTTCTCCAACTTTATCAGATTCTCTACGTTGTCTGTTTTGGGAGCACTAGGATGCTGGAAAGCAGCTCTTGCCTTTACAGCTGTATTTGTGGCAACTGGCAAGGCCTATTCTTTAGCTTACTATAATTCTCATGTGGTTTGCATTCCTCTTCCTCACCCAAGTACATTAATGGCGTCCAAGAGAATTCTGAAGGAGCTCAAAGACTTGCAGAGAGACCCCCCAACGTCATGCAGTGCAGGTCCTGTTGGAGAAGATATGTTCCATTGGCAAGCAACCATCATTGGTCCTAATGACAGTCCCTATGCTGGTGGTGTTTTCCTTGTTACCATCCATTTTCCTCCTGATTATCCTTTCAAGCCTCCCAAGGTTGCATTCAGGACCAAGGTATTCCATCCCAATATAAACAGTAATGGAAATATCTGTCTGGACATTCTCAAAGAACAATGGAGCCCTGCTCTCACCATATCCAAGGTTTTGCTGTCAATTTGTTCACTGCTAACCGACCCGAACCCAGATGACCCGCTTGTGCCAGAGATTGCTCATATGTGCAAGTCCGACAAACAGAAGTATGAGTCAACTGCTAGAGGGTGGACCCAGAAGTATGCCATGGGCTGA 768 0.4544 MGSNCSMAPAITVFMAHEHQNVYCRAVSNFIYLEKGVYIARDIFRRNGTRCFSNFIRFSTLSVLGALGCWKAALAFTAVFVATGKAYSLAYYNSHVVCIPLPHPSTLMASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKSDKQKYESTARGWTQKYAMG 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1879 255 Pfam Ubiquitin-conjugating enzyme 112 246 IPR000608 -
Alju02g1879 255 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 136 242 - -
Alju02g1879 255 Gene3D Ubiquitin Conjugating Enzyme 104 255 IPR016135 -
Alju02g1879 255 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 108 254 IPR000608 -
Alju02g1879 255 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 181 196 IPR023313 -
Alju02g1879 255 FunFam Ubiquitin-conjugating enzyme 28, E2 108 255 - -
Alju02g1879 255 CDD UBCc 110 249 IPR000608 -
Alju02g1879 255 SMART ubc_7 111 254 - -
Alju02g1879 255 SUPERFAMILY UBC-like 98 254 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1879 Alju-ChrAlju02 18064571 18067283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1879 109 221 Miscellaneous Gene Families AT3G17000 36.975 4.15e-19 83.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1879 02 18064571 18067283 Alju02g1879 02 18064571 18067283 ECH