Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0927 ATGATTGTCCAGGAGCTGACACCGAAGGAGCGCAAACAAACCAGGAAAAAAGACCCAGAGAGCGATGCGATTGCGGTGGTCGTGGAGGCGTTGCTACTGCTGTTCAGGGTTTATCTCTCCGACGACGACGACGGCGTCCAATGCACCGGAGCACGCGGCCGAAGGTCGTCGTCGTTGATGGCCTTGCAATTGCACATGACTTGGCTGCCGAGTCTTCTCACTCAGAAGCGCAAGACCGATCACCCTGTGGGCCTCAGGAACCTCGGCAACTCCTGCTACCTCAACAGCGTCCTCCAGTGTCTTACCTACACTCCTCCTCTTGCCAATTTCTGTCTTCGAAACCAGCACTCTTCCCTTTGCGATTCTGCTTCGGAGGAAAGGAAGCGGGACTGCCCCTTTTGTCTGCTAGAGAAACGGATTGTTCGTTCTCTGAGAGCGGATCTCGCCCAAGACGCTCCGTTGAAGATCCAGAGCTGTCTCAGGATTTTCGCCGAGCACTTTCGTTGTGGTCGTCAGGAGGATGCTCACGAGTTCCTGAGGTACGTTATCGATGCTTGCCACAACACCTCCCTTCGCCTCAAGAAGTTGAAGCGCAAGGGGGGCGATACTGCTGTCAATGGTAACGGCAGCAATACTGTGGTTAAGGAAATATTTGGGGGAGCCTTGCAGAGCCAGGTGAAGTGTCTCTCTTGTGGCTATGAGTCCAATAAGGTGGATGAGATTATGGATATCAGTCTTGATGTTTTGCATAGCAATTCGCTTAAGGATGCTATGCAGAAGTTCTTTCAGCCTGAGATTTTAGATGGGAATAATAAGTACAAATGTGACAATTGCAAGAAATTGGTGGCGGCTAAGAAACAAATGTCTATACTTGAAGCCCCTAATGTCCTCGTAATACAACTTAAGAGATTTGAGGGCATATTGGGCGGGAAGATCGATAAGGCTGTTGCATTTGAAGACATTTTGGTGCTTTCTAGCTTCATGTGCAAAGCAAGCCAGGATCCAATGCCACAATACAGGCTCTTTGGTACTATTGTCCATTCTGGATACTCCCCAGAATCTGGCCATTATTATGCTTATATAAAGGATGCAAAGGGCCGATGGTATTGCTGTGATGATTCTTCTGTCTCACTTTCAACCCTGAAAGAAGTTTTGTCAGAAAAGGTTTACATACTTTTTTTTTCTCGCACTAACCAAAGGGCAGTGCCAATTAGAAATGGTTTTGCTTCGAATGGTTCAAGGTCTCATGACTCTCATCACATTAATGGAAGTCAGGCGTCTGAATGTCCAAAATCTGATGCACCAACAAAAGTAGTGCATGCAAAATTAAGTTCCCAACAATCTTCTTGGAAGGACGTGTCTGCCATGTCTAAGACTGATAAAGAGCTTTCTAGCCCACGAATAAAGTTTAATTTTAATGGAAGTTCTACTTCCAAAAGGGGCCATGAAAGTTTGAATGGGAAAGTTGATGTTCTGTCGCCTTTGCTAACTAATGGACATGTAAAAGACTCAGTTGCTTTGGAGAATGCTAAGAAAGATTCTTCATCAATCAGGAATGGCTTTGATAAAAATAAAGTAGATGCCGTTGACAACTTAAAAAAGAAGGATCCGTTGTTAACAAATAAAAACAATGGTATTCATTCTGTTGAAAAATATCCTAGAAAGTCAGATGTTATGGATGACACTGGAAGAAGCAGAGCAATATCAGGTAAAGGACCTGACAACTACAAGCTAGAAGGCAATGGTCTCAACAACAAACCTAAATCATTGGAGAATAAGAGGAAGGAACCAGCGGCAACAAGCATTTTGCTTGCACATGATGATCAGTCTGAAGCAAGAGTTCAGGAACTGAAAGACATGCTTGAAAGAGAGGCAAAGTCAGTTTTAAGATCATGTGGCTGGACAGATAAGGTGCATGACTTTATGTCTTCCAGAAAGAGGTTACGTGCACAAGAAGCAGGAAATTCATCAAGTGAAGATGAAATAAAGAAGTTGCTAATAAATGAGGCCAAGGGGACTTACATATCACAGATCCCCGAGTCATTGAAAGAGGATCTGATTGAAGCATGCTTGTTGGCGTACATATGTTTCCAGGCCTTGATGTTCATAGTATGTATTACGTATTGTCTTGGTGATGGTTATATTCTTACCGGGCATCATTATGTTCTGACGGTTGGGGCCAGTGTTAGCTACAGCAGGAGATTGGGATTAAAGCGTTTCTTCACCCAAAATTGA 2235 0.4434 MIVQELTPKERKQTRKKDPESDAIAVVVEALLLLFRVYLSDDDDGVQCTGARGRRSSSLMALQLHMTWLPSLLTQKRKTDHPVGLRNLGNSCYLNSVLQCLTYTPPLANFCLRNQHSSLCDSASEERKRDCPFCLLEKRIVRSLRADLAQDAPLKIQSCLRIFAEHFRCGRQEDAHEFLRYVIDACHNTSLRLKKLKRKGGDTAVNGNGSNTVVKEIFGGALQSQVKCLSCGYESNKVDEIMDISLDVLHSNSLKDAMQKFFQPEILDGNNKYKCDNCKKLVAAKKQMSILEAPNVLVIQLKRFEGILGGKIDKAVAFEDILVLSSFMCKASQDPMPQYRLFGTIVHSGYSPESGHYYAYIKDAKGRWYCCDDSSVSLSTLKEVLSEKVYILFFSRTNQRAVPIRNGFASNGSRSHDSHHINGSQASECPKSDAPTKVVHAKLSSQQSSWKDVSAMSKTDKELSSPRIKFNFNGSSTSKRGHESLNGKVDVLSPLLTNGHVKDSVALENAKKDSSSIRNGFDKNKVDAVDNLKKKDPLLTNKNNGIHSVEKYPRKSDVMDDTGRSRAISGKGPDNYKLEGNGLNNKPKSLENKRKEPAATSILLAHDDQSEARVQELKDMLEREAKSVLRSCGWTDKVHDFMSSRKRLRAQEAGNSSSEDEIKKLLINEAKGTYISQIPESLKEDLIEACLLAYICFQALMFIVCITYCLGDGYILTGHHYVLTVGASVSYSRRLGLKRFFTQN 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0927 744 MobiDBLite consensus disorder prediction 548 564 - -
Alju02g0927 744 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 339 357 IPR018200 GO:0004843|GO:0006511
Alju02g0927 744 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 55 399 - -
Alju02g0927 744 CDD Peptidase_C19E 82 395 - -
Alju02g0927 744 SUPERFAMILY Cysteine proteinases 76 396 IPR038765 -
Alju02g0927 744 MobiDBLite consensus disorder prediction 409 433 - -
Alju02g0927 744 MobiDBLite consensus disorder prediction 409 431 - -
Alju02g0927 744 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 83 397 IPR028889 -
Alju02g0927 744 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 84 99 IPR018200 GO:0004843|GO:0006511
Alju02g0927 744 MobiDBLite consensus disorder prediction 535 594 - -
Alju02g0927 744 FunFam Ubiquitin carboxyl-terminal hydrolase 25 77 399 - -
Alju02g0927 744 Gene3D Cysteine proteinases 76 399 - -
Alju02g0927 744 Pfam Ubiquitin carboxyl-terminal hydrolase 83 394 IPR001394 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0927 Alju-ChrAlju02 7005579 7013476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0927 82 406 Miscellaneous Gene Families AT2G24640 37.160 2.19e-59 207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0927 02 7005579 7013476 Alju02g0927 02 7005579 7013476 ECH