Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0814 ATGGCATCCATTGATGCCCAGCTTCGGCAGCTGGTTCCTGCTAAAGTGAGTGAGGATGACAAACTGATCGAGTATGATGCTCTTCTTCTGGATCGGTTTCTTGATATTCTCCAGGACTTACATGGCGAGGATCTGAAGGAGACGGTTCAAGAAGTATATGAGCTTTCTGCTGAGTATGAAGGAAAGCATGACCCTCAAAAGCTTGAGGAGCTTGGAAAAGCAATGACTAGTTTGGATGCTGGGGACTCTATTGTTGTTGCAAAATCCTTCTCCCATATGCTTAATTTGGCCAATTTAGCCGAGGAGGTTCAGATTGCTCACCGGAGAAGAAACAAGCTGAAGAAAGGGGATTTTGTCGATGAGAGCAATGCAACTACAGAATCAGACATTGAAGAAACTTTCAAGAAACTTGTGGTGGACATGAAGAAGTCCCCTCAAGAAGTTTTTGATGCTCTGAAAAACCAGACTGTTGATCTGGTTCTTACTGCTCATCCTACTCAATCAGTTCGCAGATCTTTGCTTCAGAAACATGGAAGGATTCGAAATTGTTTAGCTCAGTTGTATGCCAAAGACATCACTCCTGATGATAAGCAGGAGCTTGATGAGGCCCTACAGAGGGAGATCCAAGCTGCCTTCCGAACTGATGAAATCAGGAGGACTCCTCCAACACCACAAGATGAAATGAGGGCAGGAATGAGCTACTTCCATGAAACAATCTGGAAGGGTGTCCCGAAATTTCTGCGCCGTGTTGACACAGCTCTGAAGAATATAGGGATTAACGAGCGTGTTCCTCATAATGCTCCAGTTATACAGTTCTCTTCTTGGATGGGTGGTGATCGTGATGGAAATCCAAGAGTTACTCCTGAAGTGACAAGAGACGTTTGCTTATTGGCTAGAATGATGGCCGCTAATTTGTATTATTCCCAGATAGAGGATCTTATGTTTGAGCTGTCTATGTGGCGTTGCAATGATGAGCTGCGAGTCCGTGCAGATGAAATTCATCATTCTGCTAAAAAAGATGAAGTTGCAAAACACTATATAGAATTTTGGAAGAAAGTCCCCCCAAATGAACCATACCGTGTGGTGTTGGGTGAAGTGAGGGATAGGCTATATCAGACCCGTGAACGTTCTCGCCATTTGCTAGCTCAAGGTCACTCTGATATTCCAGAGGAAGCAGCTTTCACCAACGTTGAGGATTTCTTGGAGCCTCTTGAACTTTGTTACCGATCACTTTGCGCTTGTGGTGATCGGGCAATTGCCGATGGAAGCCTTCTCGATTTTTTGAGGCAGGTCTCCACTTTTGGACTGTCACTAGTGAGGCTTGACATCAGGCAAGAATCAGAACGTCATTCTGATGTCATGGATGCCATTACCAGACACTTGGAAATAGGCTCCTACAACGAATGGTCCGAAGAGAAGCGACAGGAATGGCTTTTGTCTGAGTTGAGCTGCAAGCGGCCATTGTTTGGACCTGATCTTCCCACTACTGAGGAAATCAGAGATGTTTTGGACACATTTTATGTCATAGCTGAGCTACCACCAGACAGCTTTGGAGCTTACATCATTTCAATGGCTACAGCACCGTCTGATGTTCTTGCTGTCGAACTTCTACAAAGAGAATGCCACGTGAAGCATCCATTAAGAGTTGTCCCCTTGTTTGAGAAGCTTGCAGATTTGGAGGCTGCTCCAGCTGCTTTAGTTCGGTTGTTCTCGGTAGACTGGTACAAGAATCGGATCAACGGGAAGCAAGAGGTCATGATTGGTTATTCAGATTCAGGGAAAGATGCTGGGAGATTCTCTGCAGCATGGCAGCTATACAAGGCTCAAGAGGAACTGATAAAAGTAGCCAAACAATATGGTGTTAAGCTAACCATGTTTCATGGTCGTGGTGGGACTGTTGGGAGAGGAGGTGGGCCCACCCACCTTGCTATCCTGTCTCAGCCACCTGAGACAATTCACGGATCACTCCGTGTGACTGTTCAGGGTGAAGTTATCGAGCAATCATTCGGAGAGGAGCACTTGTGTTTTAGAACACTTCAACGTTTCACTGCTGCTACTTTGGAACATGGAATGCATCCTCCAATTCCACCTAGGCCTGAATGGCGTGCCTTAATGGATGAGATGGCTGTTATTGCCACTGAAGAATATCGATCTGTCGTATTCCAAGAACCCCGATTTGTTGAGTACTTCCGCCTGGCTACACCAGAGTTGGAGTATGGCAGGATGAACATTGGAAGCAGGCCAGCGAAGCGAAGGCCAACCGGGGGAATTGAAACACTCCGTGCAATACCTTGGATCTTTGCATGGACACAGACGAGGTTTCATCTTCCAGTGTGGCTTGGATTCGGGGCTGCATTCAAACATGTTATAGAGAAGGATGTTAGGAACCTGCAAATGCTGAGAGAGATGTACACTCAATGGCCTTTCTTTAGGGTCACCCTTGATTTAGTGGAAATGGTGTTTGCCAAGGGAGACCCTGGCATTGCTGCTCTTTATGATAAACTCCTTGTTTCACCAGAATTGTGCCCATTTGGAGAGCTACTGAGAGCCAAATATGAAGAAACTAAGAGACTCCTTCTTCAGGTGGCTGGGCACAAGGATCTTCTTGAAGGAGACCCATACTTGAAGCAAAGACTTAGGTTACGTGATTCTTACATTACTACCCTGAATGTTTGCCAAGCTTACACATTGAAACGCATTAGGGATCCGAGCTTTGACGTGAAGGAGCGACCCCACCTCTCGAAGGAGTCTCTGGAGATAAGTAAGGCGGCGGATGAACTGGTAACACTAAACCCAACAAGTGAATACGCCCCAGGTTTAGAAGACACCCTCATTCTCACCATGAAGGGTATTGCTGCTGGTTTGCAGAACACTGGTTAA 2880 0.4608 MASIDAQLRQLVPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDPQKLEELGKAMTSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHRRRNKLKKGDFVDESNATTESDIEETFKKLVVDMKKSPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPHNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRADEIHHSAKKDEVAKHYIEFWKKVPPNEPYRVVLGEVRDRLYQTRERSRHLLAQGHSDIPEEAAFTNVEDFLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESERHSDVMDAITRHLEIGSYNEWSEEKRQEWLLSELSCKRPLFGPDLPTTEEIRDVLDTFYVIAELPPDSFGAYIISMATAPSDVLAVELLQRECHVKHPLRVVPLFEKLADLEAAPAALVRLFSVDWYKNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPIPPRPEWRALMDEMAVIATEEYRSVVFQEPRFVEYFRLATPELEYGRMNIGSRPAKRRPTGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIEKDVRNLQMLREMYTQWPFFRVTLDLVEMVFAKGDPGIAALYDKLLVSPELCPFGELLRAKYEETKRLLLQVAGHKDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPSFDVKERPHLSKESLEISKAADELVTLNPTSEYAPGLEDTLILTMKGIAAGLQNTG 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0814 959 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 585 597 IPR033129 -
Alju02g0814 959 Pfam Phosphoenolpyruvate carboxylase 27 959 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju02g0814 959 Hamap Phosphoenolpyruvate carboxylase [ppc]. 15 959 IPR022805 GO:0006099|GO:0008964|GO:0015977
Alju02g0814 959 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 160 171 IPR018129 -
Alju02g0814 959 Gene3D Phosphoenolpyruvate/pyruvate domain 300 437 - -
Alju02g0814 959 Coils Coil 96 116 - -
Alju02g0814 959 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 25 959 IPR015813 GO:0003824
Alju02g0814 959 PRINTS Phosphoenolpyruvate carboxylase signature 272 287 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju02g0814 959 PRINTS Phosphoenolpyruvate carboxylase signature 159 172 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju02g0814 959 PRINTS Phosphoenolpyruvate carboxylase signature 757 783 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju02g0814 959 PRINTS Phosphoenolpyruvate carboxylase signature 434 454 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju02g0814 959 PRINTS Phosphoenolpyruvate carboxylase signature 583 603 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju02g0814 959 PRINTS Phosphoenolpyruvate carboxylase signature 212 228 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju02g0814 959 PRINTS Phosphoenolpyruvate carboxylase signature 625 654 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju02g0814 959 FunFam Phosphoenolpyruvate carboxylase 1 300 437 - -
Alju02g0814 959 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 17 959 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0814 Alju-ChrAlju02 6007685 6012997 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0814 02 6007685 6012997 Alju10g1121 10 11211825 11220877 CCT
Alju02g0814 02 6007685 6012997 Alju02g0814 02 6007685 6012997 ECH