Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0796 ATGAATCTTCCTACCCGTTTTACCCTCTTCCTTGTAATCCTACTCATCTGCGGTCACGCTTATGGCCGCCCTGTCATCCACCTTCCATCATCGTCTTCCTCCTCTGATCCGGTCTCAGATGGAGTCTCTGATTATTCGTGGGGGTTTCAGTTTCTGACGGAATCCACCTGTGAGCAGACTTATGGATTCTTACCCTGTACCACAACTGTGCTTGGAAACTTGTTCCTCATCATCGTCTACGGCTTTCTTATGTACAAGGCTGCTACTTACTTGTCCGGTGGGAGTGAACTCTTGCTCGAGATCTTAGGCCCTGGTATAGTGGGTGGCTTGTTCCTCCCCATACTCGGTGCTCTTCCAGATGCCATGCTTATACTCGTTTCCGGGCTTTCTGGCAGTAAAGAAACTGCTCAAAGTCAGGTCTATGTTGGAATGGGCTTGCTAGCTGGGTCAACAGTTCTGCTTCTGACTATTATATGGGGAACCTGCGTAATTGTTGGGAAGTGCGACCTTGTGGATTCAAAAGCAATAGATTCACAAGACACGAGGGGATTTAGCTTAACCGGTTCTGGTGTTAGTACAGATATTTGGACAAGTTATGCAGCAATGATTATGGCCATATCCGTCCTTCCATTTTTGATTGTTCAGTTACCGCAAATTCTTAATTCAACTTCAGGAAGGCACCTGGCTGTTTTGATTGCACTCGTTGTCTCTTTGTCTTTGTTGATTGCTTATTGCCTTTACCAGATTTTCCAGCCTTGGATACAGAAGAGAAAACTTAATTATGTGAAACACAAGCACGTTATTTTAGGTCTTTTGAGACACTTGAAGCAGCATTCATTGGGGAGGTTACTGAGAGATGACGGTGAACCTGATGAAGATATTATAAAAAAGTTATTTTATAGAATTGATGAGAATAATGATAAACACCTTTCTTACGGTGAACTAAGGGCACTAATTATTGGAATTGAATTTGAGGATATTGACCTGGATCATGATGATGCTGTAAAGAGAATAATGGCAGATTTTGATACTTCTCGGGATTCACTTCTTGATGTCAATGAATTTGTGAATGGTATAACTAGATGGCTTCGAAAGGCTATGCGTTCTAGGGCTGCTACTGGGGATGCTGGTCCACGGACAATAAAGTTCTTAAGTGATTTTCGCCAAGAAACAGAAAGGGAACGTGATCTATTGCATGTGGGAAATCATAGCGAAACAGTTGAAGAGGGTGTAGCTGATCCTAAATTGAATGTTATCAAGGCAGTACTGCTACTTCTTCTTGGGACTATCATAGCAGCTGTATTTGCTGATCCTTTGGTGGATGCAGTTGATAACTTTTCTGATGCCACAAAAATTCCTGCTTTCTTCATCTCCTTCATTGCGCTGCCTTTGGCTACTAATTCCAGTGAAGCAGTATCGGCAATCATTTTTTCTAGTCGTGATAAGAGGGAAACAGCCTCATTAACCTTTTCTGAGCTATATGGGGCAGTGACAATGAACAATGTGCTGTGCCTTTCGGTGTTCTTGGCCCTTGTTTATGCAAGGGGATTGACATGGGACTTCTCTTCTGAAGTGCTGGTTATTTTCATAGTTTGCATTGTAATGGGTCTCTTTGCCAGCTTCCGCACTAGCTTCCCTCTCTGGACGGCTATAATGGCTATCCTACTGTACCCCTTTTCCCTGGCTTTGGTTTATGTTCTTGATTATGTGTTTGGCTGGTCATAG 1725 0.4307 MNLPTRFTLFLVILLICGHAYGRPVIHLPSSSSSSDPVSDGVSDYSWGFQFLTESTCEQTYGFLPCTTTVLGNLFLIIVYGFLMYKAATYLSGGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSKETAQSQVYVGMGLLAGSTVLLLTIIWGTCVIVGKCDLVDSKAIDSQDTRGFSLTGSGVSTDIWTSYAAMIMAISVLPFLIVQLPQILNSTSGRHLAVLIALVVSLSLLIAYCLYQIFQPWIQKRKLNYVKHKHVILGLLRHLKQHSLGRLLRDDGEPDEDIIKKLFYRIDENNDKHLSYGELRALIIGIEFEDIDLDHDDAVKRIMADFDTSRDSLLDVNEFVNGITRWLRKAMRSRAATGDAGPRTIKFLSDFRQETERERDLLHVGNHSETVEEGVADPKLNVIKAVLLLLLGTIIAAVFADPLVDAVDNFSDATKIPAFFISFIALPLATNSSEAVSAIIFSSRDKRETASLTFSELYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVIFIVCIVMGLFASFRTSFPLWTAIMAILLYPFSLALVYVLDYVFGWS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0796 574 ProSiteProfiles EF-hand calcium-binding domain profile. 290 325 IPR002048 GO:0005509
Alju02g0796 574 Pfam Sodium/calcium exchanger protein 421 565 IPR004837 GO:0016020|GO:0055085
Alju02g0796 574 Pfam Sodium/calcium exchanger protein 75 251 IPR004837 GO:0016020|GO:0055085
Alju02g0796 574 Pfam EF-hand domain pair 295 357 IPR002048 GO:0005509
Alju02g0796 574 ProSitePatterns EF-hand calcium-binding domain. 303 315 IPR018247 -
Alju02g0796 574 SMART efh_1 334 362 IPR002048 GO:0005509
Alju02g0796 574 SMART efh_1 294 322 IPR002048 GO:0005509
Alju02g0796 574 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 48 566 IPR004713 GO:0006812|GO:0008324|GO:0016020
Alju02g0796 574 ProSiteProfiles EF-hand calcium-binding domain profile. 330 365 IPR002048 GO:0005509
Alju02g0796 574 FunFam Sodium/calcium exchanger NCL2 410 567 - -
Alju02g0796 574 Gene3D - 239 372 - -
Alju02g0796 574 SUPERFAMILY EF-hand 291 498 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0796 Alju-ChrAlju02 5873565 5877329 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0796 20 574 EF-hand Containing Proteins AT1G53210 67.901 0.0 744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0796 02 5873565 5877329 Alju02g0796 02 5873565 5877329 ECH