Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0640 ATGCGCGCCTCCAAAGCTAAAAGCCTTAGCACTCTGGGTACTCTCATACGTTCAGCCGGAAGCACTAGCACATCCAAATATTCTCTTCTAAGCAAACCCTTTTCTGAAAACTGCAATTCTAGACTCTACCGTGATTATCCGCTCTCAAACCTCAAGCTTAAGCAAGCCCCTGACTCAGAGGATCTGCCCGGTATGGTGCATATGGAAATCCGTTCAATATTGGACTCCTGTCAGTTGGACAATAGACATGAACCCAGGGATGTTGACAATGCAAAAGATTTGGTAAAAATATCAGATATGTCTCGCTTGATGATGAACATACCTCACAGTACAGTATCTCTGAAACGGAAAGAGTTTTCTCGTGAAAAGAAACGAAATTGTATGTTTGAATTCAGACAATTAAACCGTTTTCACAAGTTACTTGTATGTAGTGCTGATAAACTAGGCGCAGAGGTTGTGCATAACTTGTTCTGTAAGTTGGGACGAAAACTAGGTGTGAAAGATTACAATGCATTGATAGGAATATGCATAGATAAGGCTAGAGAAGCTGAAGATAAAGAAATTGCAATAGAGGAAATGGCCAAGGTGTTTCACATCTTAAAATCAATGAGGGAACAAGGTTTTCAGCTTGAAGAGAAAACTTACCGCCCACTTCTTTTGCATGTGATAGAGATGGGTATGGTAGAAGAGTTTCAGTTTTTTATTGACATTATCGAAGACAATAATCCCAGCTCACTTTCAAGATTGGGTTACTATGAAATGATGCTCTGGTTAAGAGTTAATAATGACGAAAAGATTCGAGATGTCTGTACCTATATTGCAAACAATGACAGTGCGGACACTTCAGAATTACGAGAAAATTATTTATTGGCTCTCTGTGAAAGTGATCGGAAGAAGGATATTTTGCAGGTGTTGGAAATTGTAGACATGAAAAAGATTTCGTCTGCCAAATCTAAAGCAAAGATATTTCAATCATTAGGAAGGCTACTATTCGAACCTGTTGCAGAGAAATTCCTTTTGGATTTCAAAATATGTGATCATGAACCAGATAATATCACAAACTTCATTGCTAGCTATGTTGTTAGCATGCCAAATTTAGCGATGGAGGATGTCGTCTCAAAATTTAAGGAATTGCACCAGACACTGAAAGTTCCACCTTCATCCTCATCATATGAGAAGCTCATTTTGCACAGCTGCAACTCGTTGAAAGTGCCTATAGCCCTTGATATTGTTGATGAAATGTGTGAAGGAGGCTTTACCTTATCAACTGAGGTGTTGCACTCCATATTACAAACTTGTGCGGAAACCCATGAATACATTTTGGCCCATCGGATCTACTCCACCATTCGTCGGTACAATTTAAAGTTGAATGGTGAAATATTCAGGTGTCTAATAGTTTTGTTCACGAAGCTGAAAGATTTTGAAAGCGCATATAAGATGCTTGATGAGTTGGATGAAAGAGGTTTGAAGCCTACAACGGGCATGTATAATGCTATAATGGGAGAACATTTTCGAGAGAAGAACATTTGTGATGGGCTGAGAGCCCTTGAGCACATGCAGCGTGCCAATGTAAGACCTGATTTACAGACTTTGCGCTATCTGATTAGCAACTCTGAAACTAAAGAGGATATAAACAAGTATTATGCAGAACTGAAGCGGTCCGGACTCCAACCCACACAGCAAATTTTGACCACCCTTATAAGTGCGTATGCAGCATGTGGAGAGGTAGAGCAGGCAAAACAGGTGATCTTAGATCCATTCATACCAGTGAGAGTCTTGAACGAAATCAAGGGTGTGCTTGCCTGCACTCTTGCATCCCACGGGCAATTGTCTGAGGCTCTTCTTATTTATGAGGAAATAAGGCAAGCTGGACAAAGTTTGGAGCCAAAATCTATCATAAGTCTCATTGAGTGCACTCAATCTGATGGAGAGTTAGATACGTTACTTGGGCTGCTTGAGGAATTGCATGATCCAGACCACTGGATTGATGGTTGCTGTAGCATTGTCTTGTACTGCATTCGAAACAAGCATATAAGTGCTGCTGTTGACTTGTGCAAGCAACTCAAGGATAAATTCCCCAGTGATGGAGTCATGGAAATTCTCTTCAAAAAGGTATTTTCTTTTGTGGAAGAGTCAGGGTCAACCCATTTGCAGAGTGGTGTGGAGTTCCTTTGGGAAATGAAGGATAAGCTTGCCCTTTTCCCACCAAAAGAGTGTAATCTTCGTCCAAGTGTTAGTGCCAACGCCCAACGCCACTAA 2259 0.4077 MRASKAKSLSTLGTLIRSAGSTSTSKYSLLSKPFSENCNSRLYRDYPLSNLKLKQAPDSEDLPGMVHMEIRSILDSCQLDNRHEPRDVDNAKDLVKISDMSRLMMNIPHSTVSLKRKEFSREKKRNCMFEFRQLNRFHKLLVCSADKLGAEVVHNLFCKLGRKLGVKDYNALIGICIDKAREAEDKEIAIEEMAKVFHILKSMREQGFQLEEKTYRPLLLHVIEMGMVEEFQFFIDIIEDNNPSSLSRLGYYEMMLWLRVNNDEKIRDVCTYIANNDSADTSELRENYLLALCESDRKKDILQVLEIVDMKKISSAKSKAKIFQSLGRLLFEPVAEKFLLDFKICDHEPDNITNFIASYVVSMPNLAMEDVVSKFKELHQTLKVPPSSSSYEKLILHSCNSLKVPIALDIVDEMCEGGFTLSTEVLHSILQTCAETHEYILAHRIYSTIRRYNLKLNGEIFRCLIVLFTKLKDFESAYKMLDELDERGLKPTTGMYNAIMGEHFREKNICDGLRALEHMQRANVRPDLQTLRYLISNSETKEDINKYYAELKRSGLQPTQQILTTLISAYAACGEVEQAKQVILDPFIPVRVLNEIKGVLACTLASHGQLSEALLIYEEIRQAGQSLEPKSIISLIECTQSDGELDTLLGLLEELHDPDHWIDGCCSIVLYCIRNKHISAAVDLCKQLKDKFPSDGVMEILFKKVFSFVEESGSTHLQSGVEFLWEMKDKLALFPPKECNLRPSVSANAQRH 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0640 752 PANTHER OS02G0132600 PROTEIN 7 739 - -
Alju02g0640 752 NCBIfam pentatricopeptide repeat 460 492 IPR002885 -
Alju02g0640 752 Pfam Pentacotripeptide-repeat region of PRORP 403 553 IPR033443 -
Alju02g0640 752 Gene3D Tetratricopeptide repeat domain 365 543 IPR011990 GO:0005515
Alju02g0640 752 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 457 491 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0640 Alju-ChrAlju02 4690877 4697858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0640 468 655 Glycosyltransferase AT1G05670 22.335 1.05e-09 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0640 02 4690877 4697858 Alju02g0640 02 4690877 4697858 ECH