Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0353 ATGTTCAAGCACCACCACTGCTACGACTACGATGACCGCCGAAAGCTCATCCGCCGCATACTCTTCGGCATCTTGGCCCTGGTAGGCCTCGTCCTCTTCGTCATCATCTTAATATTAATCATCTTGAGACCCACCAAGCCCCGTTTCACCCTCCAGGACGCCTCCCTCTACGCCTTCAACCTCTCTTCCTCCGGCGAACTACCTTCTCCCACCCTCAACCTCACCATGCAAGCCACTCTCTCTGCTCACAACCCCAATGACCAAATCGGCGTTTTCTATCGCTCCCTCGACGTCTACGTCTCCTACCGCGGCCAACAGGTCTCTCGGACCGTCCTCCTCCCTCCCTCATACCAAGACCATCACGATGTTACCGTTTGGTCCCCCTACTTGTACGGCATCGCCGTGCCGGTGCCGCCATACTCCGTGGACGCTCTGCGGGAGGATCAGAATACTGGGGCGGTGATGCTCAAGGTGGTGGTCGAAGGAGGTGTTAAATGGAAGGTGGGTTCGTGGGTGTCCGGCACGTACCACATGCACGTCAACTGTCCCGCTTATATCAGGCTCGCCGGTGGCCGCATCGACGGGACACAAAGTTGCGGTGTTGATGTTTAA 612 0.5703 MFKHHHCYDYDDRRKLIRRILFGILALVGLVLFVIILILIILRPTKPRFTLQDASLYAFNLSSSGELPSPTLNLTMQATLSAHNPNDQIGVFYRSLDVYVSYRGQQVSRTVLLPPSYQDHHDVTVWSPYLYGIAVPVPPYSVDALREDQNTGAVMLKVVVEGGVKWKVGSWVSGTYHMHVNCPAYIRLAGGRIDGTQSCGVDV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0353 203 PANTHER OS05G0367900 PROTEIN 18 187 IPR044839 GO:0098542
Alju02g0353 203 Pfam Late embryogenesis abundant protein 79 182 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0353 Alju-ChrAlju02 2674869 2675480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0353 3 199 EF-hand Containing Proteins AT5G21130 25.604 3.88e-11 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0353 02 2674869 2675480 Alju10g0502 10 4013970 4014638 CCT
Alju02g0353 02 2674869 2675480 Alju02g0353 02 2674869 2675480 ECH