Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0160 ATGGGAACAAGCAACCACTTGATTGGTTTACTAAACTTCATAACGTTCTTGCTGTCCATTCCCATACTGGGAGCAGGGATATGGCTGAGCAGCAGAGCAAACAACACAGACTGCCTCACCTTCCTCCAGTGGCCTCTCATCATCATCGGAATCAGCATCATGGTAGTCTCTCTGGCGGGTTTCGCCGGCGCCTGTTACCGCAACACCGTCCTCATGCGCCTCTACCTGCTGGTGATGTTCCTGGTCATCGCGGCACTCATTGGATTCATCATCTTCGCCTATGCCGTGACGGATAAGGGTTCCGGTCGGCCAGTAATGAACCGTGCCTATTTAGACTACTATCTGCAGGATTATTCGGGCTGGTTGGAGGAGCGGGTGGCCAGTGATACCTACTGGGGAAAGATTAGCTCATGCGTCAGGGACTCTAAGGTGTGCAGAAGGATGGTCAGAACTGTTGGTGGCATGCCTGAAACTGCTGAAATGTTCTACCTCAGAAGGCTCACTCCTATCCAGTCTGGTTGCTGCAAGCCTCCTACAGAGTGTGGGTACGTGTACGAGAGGGAGACGGTGTGGAACCCAGGGGTGGGGGCCAACCCAGATTGCAGCAGGTGGAGCAACGATCAGAGTCGGCTGTGTTATGAGTGTGACTCGTGCAAGGCTGGGGTTCTGGCCAGCCTCAAGAGGAGCTGGAGGAAGGTTTCTGTCATCAACATCGTTGTCATGATTATTCTCGTCATCGCTTATATCATTGCTTATGCTGCTTTCAGAAACAACCGCAAGATCGACAACGACGAACCCTCCGGCGAAGCTCGTATGACCAAAGTTGAACCTTCCAGGATTCATTTTTAG 849 0.5218 MGTSNHLIGLLNFITFLLSIPILGAGIWLSSRANNTDCLTFLQWPLIIIGISIMVVSLAGFAGACYRNTVLMRLYLLVMFLVIAALIGFIIFAYAVTDKGSGRPVMNRAYLDYYLQDYSGWLEERVASDTYWGKISSCVRDSKVCRRMVRTVGGMPETAEMFYLRRLTPIQSGCCKPPTECGYVYERETVWNPGVGANPDCSRWSNDQSRLCYECDSCKAGVLASLKRSWRKVSVINIVVMIILVIAYIIAYAAFRNNRKIDNDEPSGEARMTKVEPSRIHF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0160 282 PRINTS Transmembrane four family signature 66 94 - -
Alju02g0160 282 PRINTS Transmembrane four family signature 6 29 - -
Alju02g0160 282 PRINTS Transmembrane four family signature 39 65 - -
Alju02g0160 282 PANTHER TETRASPANIN-8-RELATED 1 260 IPR044991 GO:0009734|GO:0016020
Alju02g0160 282 Pfam Tetraspanin family 6 250 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0160 Alju-ChrAlju02 1344027 1346737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0160 1 275 Miscellaneous Gene Families AT5G60220 71.223 5.00e-126 360
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0160 02 1344027 1346737 Alju10g0251 10 1972361 1975674 CCT
Alju02g0160 02 1344027 1346737 Alju02g0160 02 1344027 1346737 ECH