Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3320 ATGGGTAAGGAAGAGGAAGCTCCTTTGCTAGTAAAGAGTGGTGAAGAAGAGAACAATGGTGTTGTGGTTTCATCGTCTTCTGACCATAGTACGTTTTACCAAGAGTTGAAGACGGTGAGCTCCATGGCTGCTCCAATGGTGGCCGTTACCGTATCTCAATATCTTCTGCAAGTCGTGTCGATGATGATGGTAGGGCACACTGGGAAACTCGCCTTCTCCGGCGTCGCAATCGCAACTTCTTTTGCTGAAGTAACCGGATTCAGTGTTCTTATAGGAATGGCTGGTGCATTAGAAACTCTGTGTGGGCAAACTTATGGTGCAAAAGATTTCAAAAAGCTGGGGAACTATACTTGTTGTGCAATAATCTCATTGATGTTTGTTTGTATCCCTACATCTGTGGTGTGGATATTCATGGATAAAATACTATTACTATTTGGTCAAGACCCTGAAATTTCTCATGTAGCTAGAGTGTACTGCATATACCTCATCCCAGCACTGTTTGGCTATAGTGTTCTTCAATCGCTGGTTCGCTACTTCCAGACTCAGTGTATGATCTATCCCATGGTTTTTAGCTCAATTGCGGTTCTGTGCTTGCATGTTCCTGTGTGTTGGGGTCTCGTGTATGGATTGGGAATGGGACACGTTGGAGCAGCATTAGCCATTGGGATTTCATATTGGTTGAATGTCATTGGGCTTGGACTTTATATGAAGTATTCTAAAGCATTTGAGAAAACCCAGATTGTGTTCTCTAGTTCTGCTTTACTAAACATTGCAGAGTTCTTCCAATTTGCTATCCCATCTGGACTTATGGTTTGCTTTGAATGGTGGTCCTTTGAGTTGCTTACCCTACTTGCTGGGCTTTTGCCTGATCCACAACTTGAAACATCAATTCTATCTGTCTGCCTGAGCATTACATCATTGCACTACTTCGTTCCTTATGGCGTTGGAGCAGCTGCAAGTACTCGTGTTTCGAATGCATTGGGAGCAGGTAATCCCAAGAAAGCGCGAAATACTGTTTATGTTGTTCTGGTGATTGGGATTGCCGAAGCGGTTGTCATTAGCATGGTCTTCTTCTTCTGCCGTCGCATATTGGGATTTGCTTACAGCAATGATCTGGAAGTGATAAATTATGTTGCTCAAATGGTTCCTTTCCTCTGTTTAACTGTGAGTTCAGACAGTCTTGCAGGAATACTATGTGGGATTGCAAGAGGTGGTGGATTCCAGAGAGTAGGAGCATATGTGAACCTGGGTGCATATTATCTGATTGGAATTCCTGCTTCTATCTTACTGGGATTTGTACTGCATTGGAGAGCCAAGGGACTATGGCTTGGAATCCTGGCAGGTTCCATGGTTCAAGCTGTTGTCCTTACTGTTGTAATAGCATTTACAGACTGGGAGAAAGAGGTAAGGAAGGCAAGGGAAAGACTACAAAAGGAGTCTCCAGAGAAACCCAATAACGAATCTGTATGA 1470 0.4354 MGKEEEAPLLVKSGEEENNGVVVSSSSDHSTFYQELKTVSSMAAPMVAVTVSQYLLQVVSMMMVGHTGKLAFSGVAIATSFAEVTGFSVLIGMAGALETLCGQTYGAKDFKKLGNYTCCAIISLMFVCIPTSVVWIFMDKILLLFGQDPEISHVARVYCIYLIPALFGYSVLQSLVRYFQTQCMIYPMVFSSIAVLCLHVPVCWGLVYGLGMGHVGAALAIGISYWLNVIGLGLYMKYSKAFEKTQIVFSSSALLNIAEFFQFAIPSGLMVCFEWWSFELLTLLAGLLPDPQLETSILSVCLSITSLHYFVPYGVGAAASTRVSNALGAGNPKKARNTVYVVLVIGIAEAVVISMVFFFCRRILGFAYSNDLEVINYVAQMVPFLCLTVSSDSLAGILCGIARGGGFQRVGAYVNLGAYYLIGIPASILLGFVLHWRAKGLWLGILAGSMVQAVVLTVVIAFTDWEKEVRKARERLQKESPEKPNNESV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3320 489 Pfam MatE 266 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Alju01g3320 489 Pfam MatE 45 204 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Alju01g3320 489 CDD MATE_eukaryotic 35 471 IPR045069 GO:0042910|GO:1990961
Alju01g3320 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 30 465 - -
Alju01g3320 489 NCBIfam MATE family efflux transporter 45 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3320 Alju-ChrAlju01 59547755 59551632 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g3320 01 59547755 59551632 Alju01g3320 01 59547755 59551632 ECH