Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2616 ATGCAAGAAAACGAAAGTCACACCCTCCATCATGGTTCGAGTACTACTAGCTCGACTCCCGACGGGAGCCCCGTTTTGACGTTGAATCTCAGAGAGCGTGAAGAGCCTGTTTTCTACGCCAATTTGGACCCACTTTGTCCAATGGCTTCAACGACTTCAACATCCACCGAGCCGCTTCCTTCAATAGACGATATGGCCGTCAAGGCCGTGAACAAACGCTATGAAGGATTGGTCACTGTGCGAACCAAAGCCATAAAGGGCAAAGGAGCTTGGTACTGGGCGCATTTGGAACCCGTTCTGATTCGAAACCCTGATACCGGAGTTCCAAAATCCGTGAAGCTGAAATGCTCTTTGTGTGACTCTGTGTTCTCGGCCTCGAACCCATCGAGAACTGCTTCGGAGCACTTGAAGAGGGGTACGTGCCCCAATTTCAGTTCTGGTTTGAGGCCTAATTCGTCGCTCTCGCCGATGCCGATATCTTCGGTGGCTTTGCCTGCTTCCAATAATCACAAGAAGAGAAGCTCTCCTCAAACGGCTCCAACTTCTCCTCCTTCAAGTTATCAAAATCATTCCCTGGCTTTGGTCGAGTCTTCTCGGTTTTACAGCGAATTGAGTTATTCGCAGTTGCAGAACTCAGTTGGGATGAATCAGCAGCATTTGGTGCTTTCTGGTGGCAAGGAGGATTTGAGTGCATTGGCTATGTTTGAAGATAGTGTGAAAAAACTCAAGAGTCCTAAGGCCTCACCAGGTCCTGTTTTAAGCAAGGAACAGATCAACTCTGCTATGGAGTTGCTTGCTGATTGGTTCTACGAATCATGTGGGTCTGTGTCGTTCTCAGCTCTCGAGCATACCAAATTTCAAGCCTTCCTCAGCCAGGTGGGTTTGCCGACAACAACTGTGCGACGTGAAATCTCAGGTCCTCGACTTGATGCTAGGTTCAATGAGGTCAAAACCGAGTCAGAAGCCAAAATAAGAGATGCTTTGTTTTTTCAATTATCTAGTGATGGCTGGAAGAACGAGAACTGGTACAGCTTGTGTTGTGGGGGAGAGAATTTGGTGAAGTTTACTGTTAATCTTCCAAATGGGACTAGTGTATTCCAAAAGGCAGTGTTTACTGGGGGAGTCACGTCCTCCAAGTATGCGGAGGAGCTTTTATGGGAAACAGTCGCAGGTGTAAGTGGAAATGTTGTGCAGAGATGTGTGGGAATTGTAGCAGATAAATATAAGGCCAAGGCTTTGAGGAACTTGGAGTTTCAGAGTCACTGGATGGTAAATATTTATTGTCAGCTTCAGGGGTTCATTAGTTTAATCAAGGATTTTAACAAAGAGCTCCCACTTTTCAGGGTTGTGACTGAGAATTGCCTAAAAGTTGCAAATTATATAAACAATGAATCTCAGGTTAGGAACATTTTTCTCAAGTACCGGATGCAGGAGCTTGAATACACTGGGTTGCTTCGAATCCCATCGCCCAAATGCGATTATTTGAATAACTTTGCATCTGCCTTTCCAACGTTGGAAGACATATTGGGCTGTGCTAGAGTGATCCAAATGGTTATGTTGGAAGATTCGTTTAAAGTAGCGTGCATGGAGGATCCACAAGCCAGAGAAGTTGCTGCAATTGTTCAGAGTGAGGGATTCTGGAATGAATTGGAGGCAGTTTATTCTCTTGTAAAGCTTATCAAAGCAATGGTTCAAGATATTGAGGCTGAGAGGCCACTGATTGGTCGATGCCTGCCTCTCTGGGAGGAAACAAGGAGCAAAGTGAAGGAGTGGTGTGCAAAGTACAATGTTGCAGAAGGACCTGTGGAGAAAATACTTGAAAAACGATTCAGAAAGAATTACCACCCTGCCTGGTCAGCTGCATTTATACTTGACCCACTTTACTTGATCAAAGACACTAGTGGGAAATACCTTCCTCCATTCAAGTATTTGACGCGTGAACAAGAAAAAGATGTGGATAAGTTACTAACAAGGCTGGCTTCAAGAGAAGATGCTCATGTTGTGTTAATGGAGCTCATGAAATGGAGGTCTGAAGGGCTGGACCCACTTTATGCACAGGCAGTTCAGATGAAACAAAAGGACCCTGTGACTGGGAAGATGAAAGTAGCCAACCCACTGAGCAGCAGACTTGTGTGGGAAACTTGCCTAAGTGAGTTCAAGTCTCTAGGGAAGATTGCTGTAAGGCTTATTTTTCTGCATGCAACCTCATGTGCATTCAAGAGTAATTGGTCTTTCATGAGAAAAGTTACTGCAAATAAGCATTCCCGAGTCGGATTGGAGAGAGTTCAGAAGATGATATACATTGCTGCTCATGCCAAACTTGAAAGGAGAGACATTTCCAGTGAGGAAGAAAAGGATGCAGAATTCTTTGCTATGACGGGTAGTGAGGATGGAATGCTGGCTGAGGTCTTTGCTGAGGCACCCTTAGTGTAA 2433 0.4521 MQENESHTLHHGSSTTSSTPDGSPVLTLNLREREEPVFYANLDPLCPMASTTSTSTEPLPSIDDMAVKAVNKRYEGLVTVRTKAIKGKGAWYWAHLEPVLIRNPDTGVPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCPNFSSGLRPNSSLSPMPISSVALPASNNHKKRSSPQTAPTSPPSSYQNHSLALVESSRFYSELSYSQLQNSVGMNQQHLVLSGGKEDLSALAMFEDSVKKLKSPKASPGPVLSKEQINSAMELLADWFYESCGSVSFSALEHTKFQAFLSQVGLPTTTVRREISGPRLDARFNEVKTESEAKIRDALFFQLSSDGWKNENWYSLCCGGENLVKFTVNLPNGTSVFQKAVFTGGVTSSKYAEELLWETVAGVSGNVVQRCVGIVADKYKAKALRNLEFQSHWMVNIYCQLQGFISLIKDFNKELPLFRVVTENCLKVANYINNESQVRNIFLKYRMQELEYTGLLRIPSPKCDYLNNFASAFPTLEDILGCARVIQMVMLEDSFKVACMEDPQAREVAAIVQSEGFWNELEAVYSLVKLIKAMVQDIEAERPLIGRCLPLWEETRSKVKEWCAKYNVAEGPVEKILEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKYLTREQEKDVDKLLTRLASREDAHVVLMELMKWRSEGLDPLYAQAVQMKQKDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCAFKSNWSFMRKVTANKHSRVGLERVQKMIYIAAHAKLERRDISSEEEKDAEFFAMTGSEDGMLAEVFAEAPLV 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2616 810 MobiDBLite consensus disorder prediction 127 189 - -
Alju01g2616 810 SUPERFAMILY Ribonuclease H-like 383 775 IPR012337 -
Alju01g2616 810 MobiDBLite consensus disorder prediction 1 25 - -
Alju01g2616 810 MobiDBLite consensus disorder prediction 7 25 - -
Alju01g2616 810 PANTHER OSJNBA0013A04.12 PROTEIN 69 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2616 Alju-ChrAlju01 25473127 25475559 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g3503 02 53469371 53473337 Alju01g2616 01 25473127 25475559 CCT
Alju02g3503 02 53469371 53473337 Alju01g2616 01 25473127 25475559 ECH
Alju01g2616 01 25473127 25475559 Alju01g2616 01 25473127 25475559 ECH