LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g2331	ATGTCGCTCCACGGCGGACCTACCGACCGCCGGGAAGTGGCCTCGCCGGCAGCCAGGAATGCCGTCTCTGGCGGTGGGAATGGAGTCCTCACAAGCGACTCTAGCAGGCCAGTGACGATAGTTTCGAGCCAGAGGCTGCGGTTGAATCCGAACAAGGACCACAAGCCAGATATTTACGAGGGCTTACAGTTGGAATTCAGTCCTTCGATTTTTAGCTCGCTGGAGAGGTATATGCCTCCTAGCATGCTCAGTGTGCCTCGGGAAGATAAAGTGAATTTCATGCGGGAGATTTTGCTAAAGTACCTGCCCCCCGGAGAGCAGAACAGGGCTCAAAAGCATAGAGATTACCGACAAAAGATAATGTCAAATTATCAGCCTTTACACCGAGAGTTGCGCACTTTGAATCCTACGGCCTTTTTTGTCCCAGCATTTCTGAAAGCAATCAATGATAATACAGAGCAAAGTTTTAGAAGTATAATATCTGAGCCTATTCCGGGTATTTTCACATTTGAAATGCTCCAGCCTCACTTCTGTGAGTTGTTGTTATCTGAGATTGAACATTTTGAGAAGTGGGTGAATGAAACAAAATTTCGAATCATGCGTCCCAACACAATGAATAAATATGGTGCTGTACTTGATGATTTTGGCCTTGAAACAATGCTTGACAAGCTTATGGAAGGCTTTATTCGTCCCATATCTAAAGTCTTCTTTGGAGAAGTTGGGGGATCGACCCTGGATTCTCATCATGGGTTTGCTGTTGAATATGGTAAAGATAGAGATGTTGACTCAGGTTTTCATGTGGATGACTCAGAAGTAACCTTGAATGTTTGCTTGGGTAAAGAATTTTCTGGAGGGGAATTATTTTTTCGGGGAACGCGATGTGATAGGCATGTAAATACAGGGAGTCTGTCAGAGGAGATATTTGACTACTCTCATGTCCCTGGACGAGCTGTGCTTCATCGAGGCCGGCATCGCCATGGTGCTAGAGCTACTACATCTGGTCATCGGATCAACCTACTTCTATGGTGCAGAAGCTCTGTCTTCAGAGAGATGAAAAGGTACCAAAAAGATTTCTCTGGCTGGTGTGGTGAATGCAACCGGGAGAAGAAGGCAAGGCAGCATTCATCAATTGCTGTTACAAAATTGGAACTGTTCAAAAGAGAAGGAGAGACCACCACATAA	1182	0.456	MSLHGGPTDRREVASPAARNAVSGGGNGVLTSDSSRPVTIVSSQRLRLNPNKDHKPDIYEGLQLEFSPSIFSSLERYMPPSMLSVPREDKVNFMREILLKYLPPGEQNRAQKHRDYRQKIMSNYQPLHRELRTLNPTAFFVPAFLKAINDNTEQSFRSIISEPIPGIFTFEMLQPHFCELLLSEIEHFEKWVNETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMEGFIRPISKVFFGEVGGSTLDSHHGFAVEYGKDRDVDSGFHVDDSEVTLNVCLGKEFSGGELFFRGTRCDRHVNTGSLSEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRINLLLWCRSSVFREMKRYQKDFSGWCGECNREKKARQHSSIAVTKLELFKREGETTT	393

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g2331	393	ProSiteProfiles	Fe(2+) 2-oxoglutarate dioxygenase domain profile.	246	345	IPR005123	-
	Alju01g2331	393	SMART	p4hc	165	344	IPR006620	GO:0005506\|GO:0016705\|GO:0031418
	Alju01g2331	393	PANTHER	2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2	36	381	-	-
	Alju01g2331	393	MobiDBLite	consensus disorder prediction	1	36	-	-
	Alju01g2331	393	Gene3D	q2cbj1_9rhob like domain	167	345	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g2331	Alju-ChrAlju01	20889690	20897004	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju01g2331	01	20889690	20897004	Alju01g2331	01	20889690	20897004	ECH