Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2241 ATGAAGGATCCAGTTCCAACTTCCAAGTTTCAGCAAGCAAACCAATCAGTTTTTAGGATCCTGGGAGACAAGATGGCTACAATTGATGAACCTCTGTATCCCATAGCAGTTTTGATTGATGAGTTAAAGAACGATGATATCCAGCTTAGGCTAAACTCGATCCGCAAACTTTCCACAATTGCACGTGTACTTGGGGAGGAAAGGACCAGGAAGGAATTGATTCCCTTTCTCAGTGAGAACAATGACGATGATGATGAGGTGCTTCTTGCAATGGCAGAGGAGTTGGGGGCTTTTGTCCCTTATGTTGGAGGTATAGAACATGCCAATGTGCTTCTACCTCCATTAGAAGCTCTCTGCTCGGTTGAGGAAACTAGCGTGAGGGACAAAGCAGTGGAGTCACTATGTAGAATTGGTGCTCGAATGACAGAAAAAGATTTGATAGAGTACTTTATTCCTCTGGTTAAGAGACTGGCTGCTGTTGAGTGGTTCACAGCACGAGTTTCCTCTTGTGGTTTGGTTCATATGGCTTACCCTAGTGCGCCAGAGGCCTTAAAAACTGAGCTGAGAACTATTTATGGTCAGTTGTGTCAAGATGATATGCCAATGGTTAGGAGATCTGCTGCATCACACCTGGGAAAATTTGCTGCCACTGTTGAAGTTACCCATTTGAAAACCAACATCTTGCCCATATTTGAGGATCTCACACAAGATGAGCAAGATTCTGTTCGGTTACTTGCTGTTGAAGGATGTGCAGCTCTTGGGAAATTGGTGGATCCTGAAGATTGTGTGGCAATTATTCTCCCTATCATGGTTAATTTCTCTCAGGATAAGTCATGGCGTGTGCGTTACATGGTTGCCAATAAACTATATGAGCTCTGTGAAGCTGTTGGTCCTGAGCCTACCAGGTCAGACTTGCTTCCTGCATATGTTCGGCTACTGCGTGATAATGAGGCTGAAGTACGCATTGCTGCTGCAGGAAAGGTTACACAGTTTTCTCGCATATTAAATCCAGAACTAGCTATCCAGCATATTCTACCATGTGTTAAAGAGCTATCAACTGATTCATCTCAGCATGTTCGCTCTGCACTGGCTTCAGTTATAATGGGAATGGCACCAGTTTTAGGGAAGGATGCAACAATTGAGCAGCTTCTGCCTATTTTCCTTTCACTTTTGAAAGATGATTTTCCTGATGTCAGGCTGAACATTATCAGCAAGCTTGACCAAGTGAATCAGGTAATTGGCATTGATCTATTATCTCAGTCTCTATTACCAGCTATTGTTGAGCTTGCGGAGGATCGCCACTGGAGAGTTCGACTTGCAATCATAGAATATATACCCTTGTTGGCAAGTCAGTTGGGTGTAGAATTTTTTGATGACAAGCTTGGAGCTCTTTGCATGCAATGGCTAAAGGACAAGGTTTACTCAATTCGTGATGCCGCTGCTAATAATGTGAAACGCTTAGCAGAAGAATTCGGACCAGACTGGGCAATGCAGCATATTATTCCTCAGGTTTTGGACATGGTAAACGATCAAAACTATCTCTATCGAATGACCATTCTTCATGCAATCTCTCTGTTAGCTCCTGTTCTGGGTTCAGAGATTACTTCTTCAAAACTGCTCCCTCTGGTCATAAACGCATCAAAAGACAGGGTACCCAACATCAAATTCAATGTAGCTAAAGTTCTCCAGTCTATCATTCCGGTTGTAGATCAGTCTGTGGTTGAGAAGACTATCCATCCCTGTTTGGCTGAACTCAGTGAGGATCCTGATGTTGATGTTAGGTTTTTTGCCACCCAGGCCTTAAAATCTAGCAATCAAGTCGGAAAGTCCAGCTAG 1836 0.4341 MKDPVPTSKFQQANQSVFRILGDKMATIDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARVLGEERTRKELIPFLSENNDDDDEVLLAMAEELGAFVPYVGGIEHANVLLPPLEALCSVEETSVRDKAVESLCRIGARMTEKDLIEYFIPLVKRLAAVEWFTARVSSCGLVHMAYPSAPEALKTELRTIYGQLCQDDMPMVRRSAASHLGKFAATVEVTHLKTNILPIFEDLTQDEQDSVRLLAVEGCAALGKLVDPEDCVAIILPIMVNFSQDKSWRVRYMVANKLYELCEAVGPEPTRSDLLPAYVRLLRDNEAEVRIAAAGKVTQFSRILNPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDDFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVEFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIIPQVLDMVNDQNYLYRMTILHAISLLAPVLGSEITSSKLLPLVINASKDRVPNIKFNVAKVLQSIIPVVDQSVVEKTIHPCLAELSEDPDVDVRFFATQALKSSNQVGKSS 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 344 382 IPR021133 -
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 383 421 IPR021133 -
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 500 538 IPR021133 -
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 422 460 IPR021133 -
Alju01g2241 611 SUPERFAMILY ARM repeat 32 603 IPR016024 -
Alju01g2241 611 Gene3D - 26 603 IPR011989 -
Alju01g2241 611 Pfam HEAT repeat 266 294 IPR000357 GO:0005515
Alju01g2241 611 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 28 605 - -
Alju01g2241 611 Pfam HEAT repeats 385 483 - -
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 539 577 IPR021133 -
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 305 343 IPR021133 -
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 578 611 IPR021133 -
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 111 149 IPR021133 -
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 34 72 IPR021133 -
Alju01g2241 611 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 26 605 - -
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 266 304 IPR021133 -
Alju01g2241 611 ProSiteProfiles HEAT repeat profile. 227 264 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2241 Alju-ChrAlju01 19744916 19754007 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g2241 01 19744916 19754007 Alju01g2241 01 19744916 19754007 ECH