Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1988 ATGGGTGTTGTTACTGTTGCTGAATTGAAGCCCAGTATTTCAGGGAAGAGATCATTTCGCCCAAATTCAAGCATAAGGCATGCCACTGAATGGCCAATCTCTGATGTCTCTAGCGACCTTACCGTTGAAATTGGAGCATCAAGCTTTGCACTTCACAAGTTTCCTCTAGTTTCTAAAAGTGGAAAAATTCGGAAACTGTTGTTAGAAGCAAAAGACTCAAAGGTTTCACGCATAAGTCTCCCAATTGTGCCTGGTGGAGCAGAGGCATTTGAGCTAGCTGCTAAGTTCTGCTATGGAATTAATGTTGAGTTCACTCTCTCAAACGTGGCTATGCTACGTTGTGTTGCTCATTTCTTGGAAATGACTGAAGAATATGCTGAGAAAAACTTGGAGACTCGAGCTGAAGCGTATCTAAAGGAGACAGTGCTGCCAAACATTTCAAGCTTAATATCAGTTCTTCATCGCTGTGAAATGCTTGTGCCTGTATCAGAAGAGATCAACCTTGTGAACAGGCTAATCAATGCAATAGCAAATAATGCCTGCAAAGAGCAGCTCACCTCTGGTTTGCTAAAACTTGACCACAATTTTCCTTCTAAAACCATCTCAAGCATGGAACCAGAAACACCTTCAGATTGGTGGGGGAAATCTCTCAATTCTCTTAACCTTGATTTCTTCCAACGAGTCCTTTCTACAATGAAGTCAAAGGGACTAAAACAGGACATGATCAGTAAGATTCTGATAAACTATGCACATAATTCCCTTCAGGGGATTGTTGTCAGGGACCCCAAAGTGGTGAAAGGAAGTTCGCTGGACTTGGAATTGCAGAAGAAACAAAGGGTCATTGTTGAAACCATAGTTGGATTACTACCAACTCAGTCAAGGAAGAGTCCAGTTCCAATGGCATTTTTATCAAGTCTGCTGAAAGCTGCAATAGCAGCATCAGCATCAACTTCTTGTAGGTCTGATTTGGAGAGGAGGATGGGCCTACAACTTGACCAGGCAATTCTTGAAGACATCCTAATTCCTGCAACCTCAAGTCTGACTTCCCACTGTACAATGTATGACACTGATTCAATTCTGAGGATCTTTTCCATTTTCCTAAACTTGGATGAGGAAGATGATGATGATAGTCACATGAGGGATGAGAGTGAAATGGTATATGACTTTGACAGCCCCGGATCTCCAAAACAAAGCTCAATTCTGAAGGTGTCCAAGTTGTTAGACAGTTATCTTGCTGAAATAGCATTAGACTCAAACTTGTTGCCATCAAAGTTCATAGCACTTGCAGAACTTCTCCCAGATCATGCCCGTATTGTAAGCGATGGACTCTACAGATCTGTTGATATCTTCCTAAAGGTTCATCCGAATATAAAAGACTCAGAGCGCTACCGGCTTTGCAAAACCATAGACTGTCAAAAACTGTCCCAAGAAGCTTGCAGCCATGCAGCTCAGAATGAAAGGCTTCCAGTGCAAATGGCAGTACAAGTCTTGTACTTTGAGCAAATCAGGCTGAGAAACGCCATGAATGGAGGACACAACCAGTTATTCTTTGCAGGTTTCAATGGTCAGTTTCCTCAACGTTCAGGAAGTGGTGCTGGAAGTGGAGCCATTTCCCCAAGAGATAACTATGCGTCAGTGAGAAGAGAGAACAGAGAGCTGAAGCTTGAAGTTGCAAGAATGAGAATGAGGCTTACTGACTTGGAGAAAGATCATGTGTCTATGAAGCAGGAGCTTGTGAGGTCTCATCCTGCTAATAAACTATTCAAGTCATTTACCAAAAAGCTTAGCAAGCTCAATGCTTTGTTTCGGATCAACAATATTAAGCCAATTGGAGCAAAAGGTAATGCTGATATTCGGTTTCCTTTTCAAAAGAGAAGGCGTCACTCAGTTTCATGA 1896 0.4219 MGVVTVAELKPSISGKRSFRPNSSIRHATEWPISDVSSDLTVEIGASSFALHKFPLVSKSGKIRKLLLEAKDSKVSRISLPIVPGGAEAFELAAKFCYGINVEFTLSNVAMLRCVAHFLEMTEEYAEKNLETRAEAYLKETVLPNISSLISVLHRCEMLVPVSEEINLVNRLINAIANNACKEQLTSGLLKLDHNFPSKTISSMEPETPSDWWGKSLNSLNLDFFQRVLSTMKSKGLKQDMISKILINYAHNSLQGIVVRDPKVVKGSSLDLELQKKQRVIVETIVGLLPTQSRKSPVPMAFLSSLLKAAIAASASTSCRSDLERRMGLQLDQAILEDILIPATSSLTSHCTMYDTDSILRIFSIFLNLDEEDDDDSHMRDESEMVYDFDSPGSPKQSSILKVSKLLDSYLAEIALDSNLLPSKFIALAELLPDHARIVSDGLYRSVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQLFFAGFNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVRSHPANKLFKSFTKKLSKLNALFRINNIKPIGAKGNADIRFPFQKRRRHSVS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1988 631 PANTHER OS12G0117600 PROTEIN 34 576 IPR043454 -
Alju01g1988 631 Pfam BTB/POZ domain 37 139 IPR000210 GO:0005515
Alju01g1988 631 Coils Coil 543 577 - -
Alju01g1988 631 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Alju01g1988 631 SUPERFAMILY POZ domain 25 123 IPR011333 -
Alju01g1988 631 Gene3D Potassium Channel Kv1.1; Chain A 25 144 IPR011333 -
Alju01g1988 631 FunFam BTB/POZ domain-containing protein At1g03010 16 134 - -
Alju01g1988 631 Pfam NPH3 family 211 479 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1988 Alju-ChrAlju01 16509565 16512829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1988 1 453 EF-hand Containing Proteins AT2G47860 60.206 0.0 552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1988 01 16509565 16512829 Alju01g1988 01 16509565 16512829 ECH