Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1941 ATGAAGAAAGGGAAGGGAAAGAACAACGGTCTGTTGCCAAATTCTTTGAGGATTATCTCTTCCTGCCTCAAGACTGTGTCTACCAATGCTAGCACCGTGGCTTCCACTGTACGCTCTGCTGGAGCTTCCGTGGCTGCTTCCATCTCCTCTTCTGAGGATCACAAGGATCAGGTAACATGGGCTGGTTTTGATAGGCTGGAGCTTGAGCAGTCCATCTTTAAGCATGTCCTTTTGCTTGGTTATCTGAATGGGTTTCAAGTTCTTGACGTGGAGGATGCCTCTAGCTTCAGTGAACTGGTCTCAAAGCGTGATGGTCCTGTCTCTTTCTTACAAATGCAACCTTTCCCTGTAGGCATTGATGGCCAAGAAGGGTTTAGAAAATCACATCCTTTACTGCTGGTTGTTGCTGGTGATGACTCCAGCAGTAATATCCAGAACCGCACCCATTTGGGTGGTTTGGGAGGTAACGTGGAGACTCAATCTGGGAATTGTGTCAACTCTGCAACAGCTGTTCGGTTTTACTCCTTGAAGTTTCATAATTATGTCCATACTCTGAGATTTCGGTCCACAGTTTGTATGATCAGATGCAGTTCTCGCATAGTAGCAGTTGGTCTTGCCACACAAGTATATTGCTTTGATGCATTGACTCTTGAGAATAAGTTTAGCGTGCTCACCTATCCTGTTACTCAGCTAGCAGGACAAGGAACAGCAAGTGTTAATGTTGGTTATGGTCCACTGGCTGTGGGTCCAAGGTGGTTAGCATATGCTTCCAACAGTCCACTGCCATTAAATGTAGGCCGGTTGAGCCCACAAAGTCTGAGTCCTTCTCCAGGTGTTAGTCCTTCAACATCTCCTGGCAGTGGTAGTTTGGTTGCTCGTTATGCAATGGAGTCTGGCAAGCATCTGGCGTCTGGAATAATCAAATACTGTCAGGAGCTGCTTCCTGATGGTTCTAGTTCTCCAGTGCCATCAAATGCTAGTTGGAAAGTTGGTAGGGTTGCAGGAACAGACATGGATAATGCTGGAATGGTTGTTGTGAAAGATTTTGTATCCAGAGCCATCATTTCACAATTTAAGGCGCACACTAGTCCTATATCTGCTCTATGTTTTGACCCTAGTGGGACCCTTCTGGTCACGGCATCAGTCTATGGGAATAACATCAACATCTTCCGGATAATGCTGTCATGCACACGCAAGGGATCTGGTGTTCCAAGCTATGACTGGAGCTCTTCTCATGTGCATCTTTATAAACTTCATCGTGGGATAACATCAGCTATGATCCAGGACATTTGTTTCAGTCATTTTAGCCAATGGATTGCCATTGTTTCATCCAAGGGGACATGTCATCTTTTTGTTTTATCTCCATTTGGAGGTGAAACTGGTTTCCAAATTATTAACTCTCAGGGCGAAGAACCCTCCTTGCTTCCAGTTTTATCACTGCCTTGGTGGTCCACATCATATTCCATGTCTGATCAGCAATCTTTGCCTCCTCCAGCACCTGCAGTCCTTTCTGTAGTGTGTCGCATAAAATATAGCAGTTTTGGATGGCTTAATACAGTACATAGTTCTGCTGCTAATGCGACAGGAAAAGTTTTTGTGCCCTCTGGTGCTCTTGCTGCTGTCTTTCATAATTCGTTGTTGCACTCACAGCAGCACGTCAATATGAAGGCAAAGCCCCTTGAGCATCTGTTGGTATTCACACCATCTGGTCATGTTGTTCAACATGAACTTCTGCCTTCTGTTGGCCCAGAACCTTGTGATAGCGGTCCAACAACCCAGTCAGCTTCACTCATGCACATGCAAGATGACGAGTTCAGAGTAAAAGTTAAACCTATTCAGTGGTGGGATGTTTGTAGAAGGTCAGAGTGGCCAGAGCGAGGGGATCCTTGTCACAATACCTTTAATAGACAAGATGGTACTGAGATAGTTCAAGAGAACACATGCTCTCCTGATGGCAATGGATTGGATTATTTGGATATAAATGATGGTGTTGGGGAAAAGGCGGTAGAATGCTCTGCTGGAAAGGCCCAAGGAAGATCTCTGTCCAATGCTGAGGTACAGCTAAACTTTGGAAGGCTTCCCGTATGGCAAAAGTCTAAGATTTGCTTCTACACAATGAATTCTGTGAAAGCTAGTACTGTTGCTAGTGGAGAGTCTGAAATTGAACAGATCTCTGTCATTGAAGTTGAAATAAAGCAGAAGGAGTTGTTACCTATTCTGGACCATTTCCATAACATCAGACCAAGCTGGAATGAGAGAGGTTTTGCTGGGGAAAGATCTTCAAGTTCTTCATCTCCAGTTTCTCATCAGGCTGAAGACAAGACAACTGCTGAAGTGACAGTCATTTGTCACTCAAAGCCAGCTTCACTCAGTTCTACTGAAAGCTCTGATGGGGGTTCATCAAGAAGAACTGAAAATTTCCTTGAACTTGATCAAGTTGCAAGTTGTCAGATGCTTAATGAGATCTACTTGGAACGGATGGGGGCAATCATCATTGAGCCTTCTCTGCAGAACCATATCTTGCCAGAAAATTTATCTTTCCTTCCTGGAGATTCGAAGCATGTTGATGTGCATGCTGACCATAGCATTGGAAGCAGTTTATTATTTCCGGGGAATAGGGTGACACCTGGAGTGCAAGATGATGCGGGTGTTGGGATCGATGATGGTTCTAGGGCCGTACCAGATGATGATGCTCCCACTGGAAAACTCCCCGAGGTGCCATCAATGATGCATAATACAGAAGTTATGGGTCAATCTTTCCAGGATGACCATTGCAAGTCACTGGAGCATCTTGGAAGTGACTCATTGACTGAAGTTGTTACTGATGATGTTGATGGCAGCAGTGGCCAACATGAAGGGGAGCAACCTGGGGTGGATGGAGAAGATGGGGATATGCTTGGTGGCATATTTGCCTTTTCCGAGGAAGGTTGA 2931 0.451 MKKGKGKNNGLLPNSLRIISSCLKTVSTNASTVASTVRSAGASVAASISSSEDHKDQVTWAGFDRLELEQSIFKHVLLLGYLNGFQVLDVEDASSFSELVSKRDGPVSFLQMQPFPVGIDGQEGFRKSHPLLLVVAGDDSSSNIQNRTHLGGLGGNVETQSGNCVNSATAVRFYSLKFHNYVHTLRFRSTVCMIRCSSRIVAVGLATQVYCFDALTLENKFSVLTYPVTQLAGQGTASVNVGYGPLAVGPRWLAYASNSPLPLNVGRLSPQSLSPSPGVSPSTSPGSGSLVARYAMESGKHLASGIIKYCQELLPDGSSSPVPSNASWKVGRVAGTDMDNAGMVVVKDFVSRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMLSCTRKGSGVPSYDWSSSHVHLYKLHRGITSAMIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGETGFQIINSQGEEPSLLPVLSLPWWSTSYSMSDQQSLPPPAPAVLSVVCRIKYSSFGWLNTVHSSAANATGKVFVPSGALAAVFHNSLLHSQQHVNMKAKPLEHLLVFTPSGHVVQHELLPSVGPEPCDSGPTTQSASLMHMQDDEFRVKVKPIQWWDVCRRSEWPERGDPCHNTFNRQDGTEIVQENTCSPDGNGLDYLDINDGVGEKAVECSAGKAQGRSLSNAEVQLNFGRLPVWQKSKICFYTMNSVKASTVASGESEIEQISVIEVEIKQKELLPILDHFHNIRPSWNERGFAGERSSSSSSPVSHQAEDKTTAEVTVICHSKPASLSSTESSDGGSSRRTENFLELDQVASCQMLNEIYLERMGAIIIEPSLQNHILPENLSFLPGDSKHVDVHADHSIGSSLLFPGNRVTPGVQDDAGVGIDDGSRAVPDDDAPTGKLPEVPSMMHNTEVMGQSFQDDHCKSLEHLGSDSLTEVVTDDVDGSSGQHEGEQPGVDGEDGDMLGGIFAFSEEG 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1941 976 SMART WD40_4 351 391 IPR001680 GO:0005515
Alju01g1941 976 SMART WD40_4 409 452 IPR001680 GO:0005515
Alju01g1941 976 MobiDBLite consensus disorder prediction 755 775 - -
Alju01g1941 976 MobiDBLite consensus disorder prediction 754 776 - -
Alju01g1941 976 MobiDBLite consensus disorder prediction 932 967 - -
Alju01g1941 976 SUPERFAMILY WD40 repeat-like 170 453 IPR036322 GO:0005515
Alju01g1941 976 Pfam WD domain, G-beta repeat 356 383 IPR001680 GO:0005515
Alju01g1941 976 Gene3D - 276 494 IPR015943 GO:0005515
Alju01g1941 976 MobiDBLite consensus disorder prediction 879 904 - -
Alju01g1941 976 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 3 954 IPR045142 GO:0006914
Alju01g1941 976 Pfam Breast carcinoma amplified sequence 3 498 738 IPR022175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1941 Alju-ChrAlju01 16016681 16022157 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1941 01 16016681 16022157 Alju01g1941 01 16016681 16022157 ECH