Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju01g1903 | ATGAAGCGAGTTCCGTCAACCAAATATGCAGCAGTTACGATTGCTATGCTATGCCTGTGGACTATTGCTGAGTGTGTTCCTGATACCACCATCATGAACGTTCTCTGCAACGCAGGTGTGTTTACCTCCGGCGATCCTTTTGCCATTAGCCTTGACTATGTTCTTCAAGAACTCGAGACGGTGACGTCAACTCGGAGAAATTGCGATTACTCCAACATTTCTCCTTATCCTAATGCCTTTGCCTATGGCCATGCTGCTTGTAATACCAATCTCACAGCCTCTGACTGCAACACCTGTCTTGCCGCCTCCAAGACGGCTCTGTTCGCCACGTGTCAGAGTCGGATTGGGGCTCGCTCGTCGCTCCGTGATTGTGCACTCAGGTATGAGCAATATCCGTTTGATGATTAG | 408 | 0.4926 | MKRVPSTKYAAVTIAMLCLWTIAECVPDTTIMNVLCNAGVFTSGDPFAISLDYVLQELETVTSTRRNCDYSNISPYPNAFAYGHAACNTNLTASDCNTCLAASKTALFATCQSRIGARSSLRDCALRYEQYPFDD | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju01g1903 | 135 | Gene3D | - | 19 | 133 | IPR038408 | - | |
| Alju01g1903 | 135 | ProSiteProfiles | Gnk2-homologous domain profile. | 29 | 133 | IPR002902 | - | |
| Alju01g1903 | 135 | FunFam | Antifungal protein ginkbilobin-2 | 28 | 133 | - | - | |
| Alju01g1903 | 135 | Pfam | Salt stress response/antifungal | 39 | 131 | IPR002902 | - | |
| Alju01g1903 | 135 | PANTHER | ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE | 11 | 133 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju01g1903 | 29 | 135 | Receptor kinase-like Gene Family | AT5G40380 | 30.556 | 9.45e-07 | 45.1 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Alju01g1903 | 01 | 15600392 | 15600799 | Alju01g1903 | 01 | 15600392 | 15600799 | ECH |