Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1900 ATGGAAGCTACTTGGTTCAGCTCTCGCGTCTTCCATCCACATAGCTCTCGAACTAAACCTAACATATTTCGAGGTAGACAAGCAGACCAAATCAAATTTTACTCTATAAAGTGCCATAAAAGTAGGGTTTCTGCATTTGAAAGAAGGCAATCGCTGTTGTTGAATGGGTCTTTGTTTGAAAGAGTAAATAGGAAGCATTATGTTAACTTCTCTGACAAGCGCCGAAGTGACTATTTGCATGTGGAACCTCCAAATATCCCGCATTCAAGTCAGGAAATTGGTCCACCAACTCAAAGTGATGGGGTAGAGATTGCTGCATCTCCGGATTCCAATAACTTCATAAACCTAGACTTGAGACCCAAAAAGTTTAAAAATAGGTTTCTTAATTTTGTCCGCTTGAGCTCTGTTCTGAATGGAGCTGCTGAATCATTTTTTAAAAGTGAGATACGGAGGAGGTTATTTGTGACTGCTGTATTAATTGTACTCAGTCGTGTTGGCTATTTTGTTCCTCTACCTGGATTTGACAGGAGGTTGATACCACAAGACTACCTGAGCTTTGTCTCAGGATCTGTTGATGAACTTGGTGACTACACCGCTGAGCTCAAACTTTCTCTTTTCCAGCTTGGAATCAGTCCTCAGATAATAGCATCCATTATTATGCAGGTTCTTTGTCATGTGGTTCCTTCTCTAGTGAAACTGCGAAAGGAAGGTCTAGATGGACATGAGAAGATTAAGAGTTATATATGGTGGATGTCACTTGGCTTTGCAATTTTGGAAGCTCTAATACTTGCTTGCTACTCACTTCCATATTCAATTTATGCTGCCAGCCAAAGGGTCAAGCATGTGATGGTGACAACTCTTTTGCTGGTGTGTGGTGCTATGACTATTACATGGATATGTGATACCATCTCAGAATCCGGCTTTGGTCAAGGTTCATCACTTATTATATGTGTGGGGATATTGACGGGTTATATGGAGACGTTACACAAAATGCTGATTCAGCTCTCAGTGAGTGCTGTTAGTTGGTGGCCCTATGTAGTTGCAGTGTTGGGTCTATTTACAATCGTCACTATGTGGGCAGTCGTAGTCACGGAAGGTTGCAGGAAAGTGAAACTTCAATACTATGGCTTCAAACTTGCTTCTGCTGCAAGAGAGCAATCCCCGATTACTGAAGTGGAGCCCTATATTCCTTTCAACATCAATCCGTCAGGAATGCAACCTATACTTACCACCACTTACCTCTTGGCATTTCCAAGTATTCTTGCAGGGTTGCTTGGTTCACGTTTCTGGGAGCATGTTAAGGAGATATTGAACCCTGATACGTCTGCTGGTGCTGAGCCTTGGGTTTACTACTCCGTCTATGCTTTTTTTGTCTTCTTATTCAATATATTTGATATTGCCAACTTGCCAAAGGAAATTGCTGATTACTTGAATAAGATGGGTGCCAGGATACCTAACATAAAGCCTGGGAAGGCTACAATTGAATACCTTTCGAAAGTTCAGGCATCCACACGATTCTGGGGTGGGCTATTGTTAAGTGTACTTGCAACCACATCAAGTATTCTTGATCATTATTTGCGTCGTACTAATGCTGGATTTGCAATTGGGTTTACATCAGTTTTGATTATTGTTGGTTCCATTATTGAGCTTAGAAGATCGTATCAAGCCTATAATGTAATGCCAAGTTTAAGCAAGGCCCTGAGACGGTATGGCGTATAG 1719 0.4148 MEATWFSSRVFHPHSSRTKPNIFRGRQADQIKFYSIKCHKSRVSAFERRQSLLLNGSLFERVNRKHYVNFSDKRRSDYLHVEPPNIPHSSQEIGPPTQSDGVEIAASPDSNNFINLDLRPKKFKNRFLNFVRLSSVLNGAAESFFKSEIRRRLFVTAVLIVLSRVGYFVPLPGFDRRLIPQDYLSFVSGSVDELGDYTAELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSLGFAILEALILACYSLPYSIYAASQRVKHVMVTTLLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLHKMLIQLSVSAVSWWPYVVAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPSGMQPILTTTYLLAFPSILAGLLGSRFWEHVKEILNPDTSAGAEPWVYYSVYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSILDHYLRRTNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYGV 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1900 572 FunFam Preprotein translocase subunit SCY2, chloroplastic 137 562 - -
Alju01g1900 572 Pfam SecY 204 550 IPR002208 GO:0015031|GO:0016020
Alju01g1900 572 PRINTS Preprotein translocase SecY subunit signature 305 328 - -
Alju01g1900 572 PRINTS Preprotein translocase SecY subunit signature 448 470 - -
Alju01g1900 572 PRINTS Preprotein translocase SecY subunit signature 279 304 - -
Alju01g1900 572 PRINTS Preprotein translocase SecY subunit signature 153 171 - -
Alju01g1900 572 PRINTS Preprotein translocase SecY subunit signature 403 422 - -
Alju01g1900 572 PRINTS Preprotein translocase SecY subunit signature 244 267 - -
Alju01g1900 572 PRINTS Preprotein translocase SecY subunit signature 203 223 - -
Alju01g1900 572 PRINTS Preprotein translocase SecY subunit signature 536 554 - -
Alju01g1900 572 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 143 560 IPR002208 GO:0015031|GO:0016020
Alju01g1900 572 Gene3D SecY subunit domain 137 562 IPR023201 -
Alju01g1900 572 SUPERFAMILY Preprotein translocase SecY subunit 134 557 IPR023201 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1900 37 572 Miscellaneous Gene Families AT2G31530 73.840 0.0 803
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1900 01 15553407 15561261 Alju01g1900 01 15553407 15561261 ECH