Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1882 ATGTCTTCCCTCCTCCTCTCTCCTCTCCGTTCTTCCTCTCCCTCTCTTCCTTGTTCCTCTTCCAAATCCTCCCTCCTCCTCGATTTCGCTGATATATTTCAAGGTGGTCTTTCAACGTTCAAGTGGCGTGAGGTTGTGCAGGATGACATCCACGAGGACGAAGCTCATAAGGTTTGGGAGAACAAAGAGATCAAAAGGCGAGTGGAGGGTATTAGGCAGATATTGGGTTCCATGGATGATGGTGACATCAACATATCTGCTTACGACACAGCATGGGTTGCTCTTGTTCGACATGTTAATGGAAGTGGGGCCCCACAATTCCCTTCCAGCCTCGAGTGGATAGTGAATAACCAGCTTCCTGATGGTTCATGGGGTGATAACCAAGTTTTCTCTGCTCACGATAGAATCATCAATACGTTGGCTTGTGTTATTGCATTAAAAACATGGAATATCCACCCTGAAAAGTGCCACAAAGGGCTGGCATTTCTCAGAGAAAACATCAGCAAGCTTGAGGATGAGAATGTTGAGCATATCCCAATAGGTTTTGAAGTTGCTTTCCCTTCACTTCTGGATATAGCTCGTGATCTGAACATTGAAGTCCCAGATGATTCCCCAGTCCTGAAACAAATCTTGGAGATGAGAAATGTAAAGCTGACCAGAATACCAAGAGAGATGATGCATAAAGTGCCCACAACACTGCTTCATAGCTTGGAAGGCATGTCAGGATTGGATTGGAAACAGCTTCTAAAATTGCAGTGTGAAGATGGCTCTTTCTTGTTTTCTCCCTCCTCCACTGCCTTTGCTCTTATGCAGACTCATGATCTAAATTGCCTCAATTACTTGAATAAAGTTATCACCAAGTTCAATGGTGGAGTTCCTAACGTGTACCCCGTGGATTTGTTCGAACATATTTGGGTCGTTGATCGGCTAGAGCGCCTTGGGATATCCAGATATTTTAAGCGAGAGGTTGAGGACTGTGTCAGCTATGTTCATAGATATTGGACCGATAAGGGCATTTGTTGGGCAAGAAATTCAAATGTTCAGGATATTGATGACACAGCAATGGGATTCAGAATGCTAAGATTACATGGCCGTGAAGTTTCAGCCAATGTGTTTAAGAACTTTGAGAGAAATGGTGAGTTCTTCTGCATTGCCGGGCAATCAACACAAGCAGTGACAGGAATGTTCAATCTTTATAGGGCTAGTCAAGTAGGGTTTCCAGGAGAGAAGATTCTGGAAGATGCAAAGAAGTTCTCAGCCAAATTTCTGAGAGAGAAAAGAGCAGCAAATGAGCTCATAGATAAATGGATCATCATGAAGAACTTACCTGGAGAGGTGGCTTATGCATTGGACGTGCCTTGGTTTGCAAGCTTACCTCGAATAGAGACAAGGTTTTATATTGATCAGTATGGTGGTGACACTGACGTCTGGATTGGCAAAACTCTTTATAGAATGGGGAAGGTGAGTAATAGCACTTATCTTGAGCTGGCAAAGTTAGATTACAACAATTGCCAAGAGCTGCATCAAACAGAATGGAGCAATATTCAACAGTGGTACTCTGAGTGCAGATTGGGAGATTTTGGATTGAACAGAAGATCTCTTCTGATTGCTTATTTTGTGGCAGCATGCAGCATATTTGAGCCCGCAAGGTCTCCAGAGAGAATTGCATGGGCCAAAACAGTAGCGTTGTTTGAAACCATTACAACTTATGTTAGTGATGAAGAAAAGATGAATGCTTTTGTTGAGAAATTCAACTACTGCATTAATGGAGGAGGAGATTCCTCCATTGGCTGGAGGTTGAGTGGGTACAAAACAGGGCAGGGACTAGTGGAGGCTTTGGTTGGAACCATAGATCAACTCTCTTGGGAAACTCTTCTATCTCATGGACATAAAATTGGCCGTGACATGCAACAAAATTGGCAAAAGTGGCTTTCAAGTTGGCATGGGGGAGGAGGAGACAAGAGGGAAGGACAAGCAGAGCTTTTGGTGCAGATAATTAACCTAAGCGCAGGCCACAGAATATCAGAGGAAATACTGTCCAATCATCAATACCAGCATCTACTTGAGCTCACAGACACTGTATGTTACAGTCTCCGATGTCATCAAAAGGTCAAGGCCCACGAGAATGGAAGTTGCAGTGTGAAGTACAGCATCAGCACCACAGAAACAGAGGCAAAGATGCAAGAACTTGTGCAATTGGTGCTTCAAAGATCTTCTAGTGACATTGATTCCAACATCAAGAACACTTTCCTCACAGTAGCCAAGAGTTTTTACTACGAAGCTTTCTGCGACGAAAGAACCATCAACTTCCACATTGCCAAAGTTCTCTTTGAGAAAGTCATTTAA 2346 0.4344 MSSLLLSPLRSSSPSLPCSSSKSSLLLDFADIFQGGLSTFKWREVVQDDIHEDEAHKVWENKEIKRRVEGIRQILGSMDDGDINISAYDTAWVALVRHVNGSGAPQFPSSLEWIVNNQLPDGSWGDNQVFSAHDRIINTLACVIALKTWNIHPEKCHKGLAFLRENISKLEDENVEHIPIGFEVAFPSLLDIARDLNIEVPDDSPVLKQILEMRNVKLTRIPREMMHKVPTTLLHSLEGMSGLDWKQLLKLQCEDGSFLFSPSSTAFALMQTHDLNCLNYLNKVITKFNGGVPNVYPVDLFEHIWVVDRLERLGISRYFKREVEDCVSYVHRYWTDKGICWARNSNVQDIDDTAMGFRMLRLHGREVSANVFKNFERNGEFFCIAGQSTQAVTGMFNLYRASQVGFPGEKILEDAKKFSAKFLREKRAANELIDKWIIMKNLPGEVAYALDVPWFASLPRIETRFYIDQYGGDTDVWIGKTLYRMGKVSNSTYLELAKLDYNNCQELHQTEWSNIQQWYSECRLGDFGLNRRSLLIAYFVAACSIFEPARSPERIAWAKTVALFETITTYVSDEEKMNAFVEKFNYCINGGGDSSIGWRLSGYKTGQGLVEALVGTIDQLSWETLLSHGHKIGRDMQQNWQKWLSSWHGGGGDKREGQAELLVQIINLSAGHRISEEILSNHQYQHLLELTDTVCYSLRCHQKVKAHENGSCSVKYSISTTETEAKMQELVQLVLQRSSSDIDSNIKNTFLTVAKSFYYEAFCDERTINFHIAKVLFEKVI 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1882 781 FunFam Ent-copalyl diphosphate synthase, chloroplastic 504 781 - -
Alju01g1882 781 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 255 474 IPR008930 -
Alju01g1882 781 MobiDBLite consensus disorder prediction 1 20 - -
Alju01g1882 781 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 87 270 IPR008930 -
Alju01g1882 781 Gene3D Farnesyl Diphosphate Synthase 504 781 IPR008949 -
Alju01g1882 781 FunFam Ent-copalyl diphosphate synthase 87 299 - -
Alju01g1882 781 Pfam Terpene synthase, N-terminal domain 244 450 IPR001906 GO:0010333|GO:0016829
Alju01g1882 781 SFLD Terpene Cyclase Like 1 N-term 57 484 - -
Alju01g1882 781 Gene3D - 71 502 IPR036965 GO:0010333|GO:0016829
Alju01g1882 781 SUPERFAMILY Terpenoid synthases 490 756 IPR008949 -
Alju01g1882 781 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 57 484 - -
Alju01g1882 781 FunFam Ent-copalyl diphosphate synthase, chloroplastic 275 501 - -
Alju01g1882 781 Gene3D - 87 299 - -
Alju01g1882 781 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 61 779 - -
Alju01g1882 781 Pfam Terpene synthase family, metal binding domain 494 647 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1882 Alju-ChrAlju01 15340921 15346152 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1882 01 15340921 15346152 Alju01g1882 01 15340921 15346152 ECH