Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1878 ATGAGCGTGATAACATCCACCTCCGCGCCCCAGCTCCCGGTAAAGCCTGCTGCCATGGATACTCCTCCTCTGAACACCCCCTCCTCGTCAATGACCAAGCGTCCCTGTCCTTCCCAAAACCCAAACCCTAGATTCCATAACCTCGACCAGGTGGACCAGCCCCTCGAAAACTTCCTCCGCCTTTCTGAATTCCCCTCCCTCTCCCTCGATCTCTCCTTGGAGAGGCTTCTCTCTTCATTGCCCACCGATGCCGATCAGACCCTTCTTATCGATCGCGCCCTTCGTATGGGATCCATGCTTCTCGATGCTGCCAAACACTCTTCCCGAAAGCGAGCCTCCAACCACAATTCTCTTACCTGGCCTCTTCCTCCCGACCTTACCGTCAAAGTGTTTTCATCTCTTGATACCCAGAGCCTATGCCATGCAGCAGCCACTTGCTCAATGTTTAACAAATGTGCTAGGGATCCTTTGTGCTACGAAAATATTGATTTGACAACACTTGTTCCCAAGGTTAACAATGCAGTTGTTTCCACGATGATTCAGCGAGCTGGAAAGGCCTTAAGGTCTCTTAGGATCGGTGTTGTTGCTGGTGCTCATGCGTCAACAGGATCCTGTCAGCCATTGGTTTATACCATTAGAAATGCCACTGTAGATGCATCCAACTTTTCATGGAATGACAAGAGATCTCGGCAAGGGAGAGAGTCATCCATTCTTACTAGATCCTGTTTAAACCCTTTAACCGGATGTGATGATGCTCCAGGGACTCTTCTGAGGAAGTTGCACTTGTACAATATTGAAAGAATGGATAATGCATCCCTTTGTGCGGCAGTAGCAGCTTGCCCTTCTCTCCTTGACTTGGAAATAGTTGGACTTCATGTAGAACTGAGGCAAACATTAATGTCAGTGAGTATGAACTGCCACTTGATAGAGCGTTTGTTTTTTGAGTCTTCAAAAACAGGCAGAGATAACAGCTTGAAAACGCCGACCTGCATTCATCTTGTTAACAGTTGTCTCCATCTAACTTCTTTGTCCCTAAGAGGGTTTAAATTACATGATTATAAAGTTCGTATATTGCTTAAGGGGTTTCAGAAACTGAAATATGTTGATTTTTCTACGTCCTATTCAATCACTGGAAACTTTTTAAGAAACCTTGGAAGTAGCAATGGAGGGAATTTGCTTGAGGTATTGATTTTGAGGGACTGCATGCATCTGAAAGAGGTGGAAGTTGCTAGATTGTTGACAGCAATTCTTGCAGGAGATTTCAAATGTCTTGTACATCTTGACATATCCAATAGGGAAGGTTTAGCATCTGAAGGGGACTGGTACCGCAGGTGCTACAACTCTAGTATCATGCCTATTAAGCATGTTTTAGAAGCAAGGCCGGATTTGTGTTTGCTGGCTGAATATCCATCAGAAGGAAGTTACATTGAGACAATTGATTCTGAACTGAATGGTGATATGAGTTTTCCAAGCCATACTTCAGATGAAATAAATTGTTTTAGTACATCTGAAAGCAGCTACAACAGTGATCATAGCAGTAGACATGAGGATGGTCAAGAAGCAAGCTATGTGATTTTTGAGGAAAGTTCAGATGAGATAGACTTTCTGACCCCGTAG 1617 0.4453 MSVITSTSAPQLPVKPAAMDTPPLNTPSSSMTKRPCPSQNPNPRFHNLDQVDQPLENFLRLSEFPSLSLDLSLERLLSSLPTDADQTLLIDRALRMGSMLLDAAKHSSRKRASNHNSLTWPLPPDLTVKVFSSLDTQSLCHAAATCSMFNKCARDPLCYENIDLTTLVPKVNNAVVSTMIQRAGKALRSLRIGVVAGAHASTGSCQPLVYTIRNATVDASNFSWNDKRSRQGRESSILTRSCLNPLTGCDDAPGTLLRKLHLYNIERMDNASLCAAVAACPSLLDLEIVGLHVELRQTLMSVSMNCHLIERLFFESSKTGRDNSLKTPTCIHLVNSCLHLTSLSLRGFKLHDYKVRILLKGFQKLKYVDFSTSYSITGNFLRNLGSSNGGNLLEVLILRDCMHLKEVEVARLLTAILAGDFKCLVHLDISNREGLASEGDWYRRCYNSSIMPIKHVLEARPDLCLLAEYPSEGSYIETIDSELNGDMSFPSHTSDEINCFSTSESSYNSDHSSRHEDGQEASYVIFEESSDEIDFLTP 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1878 538 FunFam F-box protein isoform A 115 416 - -
Alju01g1878 538 Pfam F-box-like 122 164 IPR001810 GO:0005515
Alju01g1878 538 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 122 399 - -
Alju01g1878 538 SMART fbox_2 122 162 IPR001810 GO:0005515
Alju01g1878 538 SUPERFAMILY F-box domain 108 166 IPR036047 GO:0005515
Alju01g1878 538 Gene3D Ribonuclease Inhibitor 319 447 IPR032675 -
Alju01g1878 538 MobiDBLite consensus disorder prediction 22 41 - -
Alju01g1878 538 MobiDBLite consensus disorder prediction 1 41 - -
Alju01g1878 538 SUPERFAMILY RNI-like 255 432 - -
Alju01g1878 538 Gene3D - 105 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1878 Alju-ChrAlju01 15294397 15299286 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1878 01 15294397 15299286 Alju01g1878 01 15294397 15299286 ECH