Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1864 ATGATAACGCTCGCACAAAAACGAAAACAAGAATTCCATTTCGATTTGCTCAAGTCACAAAACACGGCATTGTTTTCTGTAACTGCGTTTCGTGGGGGTCCACTTCCATCAAATTCCCTTCCTTGCGCCACTCTCGTCGTCGTCCTCCTCCTGCTACCCCTGCCACCTCAACAAGGTCGAAATTCCAATTTTAATTTAAGCGCTATGCCACTGGTTGTGCATGAAGTGAAGGTGAACGCGAGGCAAGGTCAAGATTGCAATTCTGGGGTTTCCGTGGGTTTCTGGCACTTTGTTCCTTCCTTGCTTAAGGATTATTTCTTCAGTTTCTCTGTGACTCTAAGAGGTGGCCCTGGACAGATTGACAGAACGGATGAAATAGTGATTATCATGACTGGATTGATCGAAGGACTTCCTGACGATGTTGCAATAATGTGCCTTGCAAGGGTTCCCTATTACCTCCACCCAAAGTTAAAGCTTGTCTGTCACTCTTGGCGAGCGATCTTTCAAAGCCTTGAACTATTTAAAGTGCGACAGGAGGTTGGTTCAACTGAGGATTTGTTATGTGTATGTGCTTTTGATCCAGAGAACCTATGGCAGATGTATGACCCTCTACGGGACCATTGGATTACACTTCCTGTTCTTCCCTCAAAAATCAGACACCTTTCCCACTTTGGTGCTGTCTCCACAGCTGGAAAGTTGTTTGTGATTGGCGGCGGAAGCGATGCTGTAGATCCATTGACCGGTGATCAAGATGGGAGGTTTGCAACAAATGAAGTCTGGTCATATGACCCTGTAGTTCGGAAGTGGGCCGCACAGGCTCCGATGCTAGTCCCACGTGCTATGTTCGCATGCTGTGTTTTGAATGGAAAAATAATTGTGGCTGGCGGCTTCATTAGCTACAGAAAAGCAATATCTCAATCAGAAATGTATGACCCTGAAAAAGATGAGTGGATTGAAATGCCTAATCTTCAGTGCACCCATAATTCAGCTTGTTCAGGAGTAGTTATTGGAGGAAAGGTACACGTATTGCATAAAGGGCTGTCAAAAGTGCAGGTTTTAGACAATGGAGGGCCTCCCAGTTGGACTGTCGAGGAAAGTGGGTGGCTCCAAGGTCCAATGGTGGTCGTTGGAGGCCGCCTTTATGTGATGAGCCATGGATTTATTTTCAGGCAGGAGAAAGGAGCAAGAGAGGTAGTGTGTTCAGCATTTGAGTTTCAAAGGAGAATTGGGATCGGAATGGCTGGGGTTGGTGGTGATCTATATGTAATTGGAGGCGTGGTTGGCCCTGACTGGTGGAACTGGAATGTTGGGCCTTTGGCTGATGTTGATATTCTCACACTTGGGGGTTTCAGAATTTGGCGTAAGGCGTCTCCAATGTCACGGTGTCGTGGTACTATCCTTGGTTGTACAGCGCTGATAATTTAG 1425 0.4653 MITLAQKRKQEFHFDLLKSQNTALFSVTAFRGGPLPSNSLPCATLVVVLLLLPLPPQQGRNSNFNLSAMPLVVHEVKVNARQGQDCNSGVSVGFWHFVPSLLKDYFFSFSVTLRGGPGQIDRTDEIVIIMTGLIEGLPDDVAIMCLARVPYYLHPKLKLVCHSWRAIFQSLELFKVRQEVGSTEDLLCVCAFDPENLWQMYDPLRDHWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGRFATNEVWSYDPVVRKWAAQAPMLVPRAMFACCVLNGKIIVAGGFISYRKAISQSEMYDPEKDEWIEMPNLQCTHNSACSGVVIGGKVHVLHKGLSKVQVLDNGGPPSWTVEESGWLQGPMVVVGGRLYVMSHGFIFRQEKGAREVVCSAFEFQRRIGIGMAGVGGDLYVIGGVVGPDWWNWNVGPLADVDILTLGGFRIWRKASPMSRCRGTILGCTALII 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1864 474 SUPERFAMILY Kelch motif 190 462 IPR015915 GO:0005515
Alju01g1864 474 CDD F-box_AtAFR-like 133 177 - -
Alju01g1864 474 SMART fbox_2 137 177 IPR001810 GO:0005515
Alju01g1864 474 Pfam Kelch motif 221 275 IPR006652 GO:0005515
Alju01g1864 474 Pfam Kelch motif 278 323 IPR006652 GO:0005515
Alju01g1864 474 SMART kelc_smart 232 289 IPR006652 GO:0005515
Alju01g1864 474 SMART kelc_smart 290 337 IPR006652 GO:0005515
Alju01g1864 474 PANTHER OS02G0202900 PROTEIN 128 385 IPR045887 -
Alju01g1864 474 SUPERFAMILY F-box domain 133 170 IPR036047 GO:0005515
Alju01g1864 474 Gene3D - 190 463 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1864 Alju-ChrAlju01 15228903 15232341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1864 137 333 Miscellaneous Gene Families AT4G33900 29.126 1.06e-13 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1864 01 15228903 15232341 Alju01g1864 01 15228903 15232341 ECH