Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1741 ATGGACAAGTTGAACCTAGCTCAACTGGGTGAGAAGCTGAAGACAAGTGGAGCTCAAATGAGTCGGATTGTTAGTGACAAAATGAAGGAAATTTTGCAAACCCCAACTCCTGAATCAAAGATGGTTGACGAAGCAACATCGGAGATTTTAGAGGAACCCAACTGGGGCATGAATTTGAGGATATGTGCGATGATCAATAGTGGAGAGTTTAATGGATCCGAGATTGTGAAGGCCATAAAGAAGAAGATTTCAAGCAAGAACCCGGTGGGCCGGATGCTCAGCCTTGACTTGCTGGAAGCCTGTACTATGAATTGTGAGAAAGTGTTTTCTGAGGTGGCATCAGAGAAGGTGCTTGAAGATATGGTTCGAATGATTGATAATCCACAAACAGATCATCAGAATAGAGGAAGGGCTTTGCAATTGATCAGGGCTTGGGGAGAGTCAGAGGATCTTGCCTATCTACCAGTGTTTCGTCAAACCTATATGAGTCTGAAAGGAAGAAATATGCCTCTGGAGACAGATGGAGGAAATTCAGCGCATGTGCCATATTCCTTGGAGTCTCATGTACAGGAAGATTCATTAGATCCTCCTGAAAGTTATCCTGTTCCTGTTGCTCCATTGCATGAGATGAATGGATCTGCTTTCTCTTCTAATCCCAGGAGCCTATCAGTTGAAGAAAAGAAGGAGCATCTTGTCATTGCTCGAAACAGTCTGGAATTACTCTCTACCATATTTAATTCTGGAGCAGAGCCAAAATTGTTGAAGGAAGACGTGACTGTGAGCTTGTTGGAGAGGTGCAGGCAGTCACTGTCTGTCATTAAGGTGATTGTGGAAAGCACCACTGACGATGAGGGAACACTTTTTGAGGCTTTGAACCTTAATGACGAGCTACAACAGGTAGTTTCCAAGTACGAGAAGTTGGAAGCTGCCCAAGATTCTGGAGCACAACCACTCCCAGTTGCTGATGCCACAGAGCATGTTGCAGAAGCTGTTCAAAATCCCATCGCACCACCCGAAAGCTTTGGAGGTGATGAATCTGGCGAGCCAGATGCTGCTGAGAGACTTCAAAGGAAGGCAACCAATAAGACTGACGCTCCTGAGGTCAATTCTACTGCTGTTGTTGATAGTCACTGTGAGGCCAACACAACGAATGCAAAAGAGAAGGATGCTGAATCGGATGGCAAGAGAAATGCCGAATGA 1200 0.4517 MDKLNLAQLGEKLKTSGAQMSRIVSDKMKEILQTPTPESKMVDEATSEILEEPNWGMNLRICAMINSGEFNGSEIVKAIKKKISSKNPVGRMLSLDLLEACTMNCEKVFSEVASEKVLEDMVRMIDNPQTDHQNRGRALQLIRAWGESEDLAYLPVFRQTYMSLKGRNMPLETDGGNSAHVPYSLESHVQEDSLDPPESYPVPVAPLHEMNGSAFSSNPRSLSVEEKKEHLVIARNSLELLSTIFNSGAEPKLLKEDVTVSLLERCRQSLSVIKVIVESTTDDEGTLFEALNLNDELQQVVSKYEKLEAAQDSGAQPLPVADATEHVAEAVQNPIAPPESFGGDESGEPDAAERLQRKATNKTDAPEVNSTAVVDSHCEANTTNAKEKDAESDGKRNAE 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1741 399 Coils Coil 290 310 - -
Alju01g1741 399 MobiDBLite consensus disorder prediction 347 361 - -
Alju01g1741 399 MobiDBLite consensus disorder prediction 334 399 - -
Alju01g1741 399 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Alju01g1741 399 MobiDBLite consensus disorder prediction 362 380 - -
Alju01g1741 399 Gene3D - 214 311 IPR038425 -
Alju01g1741 399 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Alju01g1741 399 CDD VHS 39 165 - -
Alju01g1741 399 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Alju01g1741 399 Pfam VHS domain 38 147 IPR002014 GO:0035091|GO:0043130
Alju01g1741 399 SUPERFAMILY GAT-like domain 195 308 - -
Alju01g1741 399 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Alju01g1741 399 PANTHER TOM1-LIKE PROTEIN 1 1 388 IPR044836 GO:0035091|GO:0043130|GO:0043328
Alju01g1741 399 MobiDBLite consensus disorder prediction 381 399 - -
Alju01g1741 399 SUPERFAMILY ENTH/VHS domain 34 168 IPR008942 -
Alju01g1741 399 Gene3D - 27 181 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1741 Alju-ChrAlju01 13997460 13999796 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1741 01 13997460 13999796 Alju01g1741 01 13997460 13999796 ECH