Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1670 ATGACGGGATTTCCTCGGCCTAATGATCAGACCCCACCATCGTCATCGTCTTCCCGTAGTTCCAACAGCAGTGGAGCAAATGTATTTAATTTGCTAGCGCATAGAGAGATTTCTGCAAAATCAAAACATGTACCAAAACAGCACTGGGGAGAAGCTTCTGAACCAAAAGCTGGTTCTTGCCCTCATCCTAAAAATGATGCAGTGAGAGATTCGAAACGCAGTCTCCTCTCATGGGTTGAGGCAGAGTCATTGCGGCATTTATCAGCTAAATATTGTCCTTTGTTGCCTCCCCCACGATCAACTATTGCAGCAGCATTTAGTCCAGATGGAAAAGTACTTGCATCGACACATGGTGACCATACCGTAAAGATAATTGATTGGGAAACTGGAAGTTGCTTGAATGTGTTAATTGGCCATAGAAGGACCCCTTGGGTGGTTAGGTTCCATCCGTTGCAACCACATATACTTGCTAGTGGGAGCTTGGACCAAGAAGTTCGATTATGGGATGCAAACACGTCAAAATGCATATTATTTCACCATTTCTATCGCCCCATTGCATCCATTGCTTTTCATGCCGAAGGGGAAATACTTGCGATTGCATCAGGCCACAAGCTGTATGTATGGCACTACAACAAGAGAGGTGAAGGATCCTCACCTACATTTGTGTTGAAGACAAGGCGCTCACTTAGGGCTGTTCATTTCCACCCTCATGCAGCACCATATCTTTTAACTGCCGAGGTTAATGATCTTGACTCTTCAGATTCCTCTATGACACGGGCTACATCTCCTGGTTATTTACAATATCCCCCACCTGCTGTGATTGTTGCAAATATTCATCTTAAGGAGCATATTGCCTTTCCCAGCAATGAACTGCCTTATTTGTCATTACCTTTTTTCTTCTTGCCTTCATTTAATGCTGATGATTCAAGAGTGGAAACGCATAATGCTAGTCTTGTTACTGGTTCAGAGAACATGCAAGTTGAATCTTCTCCCTCTGCACTGTTTCAAGCAGTCACAAATGCTACTGAGCAATATAATAATACAGTGTCTCCCATGGATACAGTCTCTGAGATTCCTACTACCTCTCAAACTGGTACAGAATACGCTGCCCATAGTACCTTCTCTAATGGAACGGGAACTGGTATCAGTAGCCTTGCTGTGGATGGTATGGAGACTGATGAAACAGTACCGGCCGAAGGAAGCCAACATGGAAACACTGCAAATGTCAGTTCTCTGAGTAATGTGCTGCATGGTTTATACAGACAAGCAACAAATCATGAGGGTCTTTCTGACTTGGGTCAATTTCAACGTTTTTTCGCCTCAAGAGACCCAAGTGGATGGGAGCTACCCTTTCTGCATGGCTGGTTAATGGGTCAAAGCCAAGTTGGTGTCCCCTTAGTGCTTCCTCATCTGAGTGGTAGTCGGGACAGCCTGGCTCAGATTGGTTCTTCCACCATGGCATCTAACTTGTCCCCTCATGATGATGAAGCAACATCTTCATCTTCAGCTATTCCAGGAAGCATGAATATGCCAGGAGCTCTGGGGAGATCTGGTTTGCGCAGTTATTTTCCACAATCTCAAGTTCCTGCATCCGAATCTGGCAATATGGCCTCTTCTGTCAATATCCCGCATGGCGTCACAGACATTCAAACCATTATAAGTCGTATTCAGTCAGAACTTGCCACATCAGTGGCTGCTGCAGCTGCTGCAGAGCTGCCTTGCACAGTGAAGCTAAGAGTATGGTCGCATGACATAAAAAACCCCTGTGCCCCACTAAATGCTGAAAGATGCCGCCTTACAATACCGCACGCTGTCTTGTGCAGTGAAATGGGTGCCCATTTTTCACCATGTGGTAGGTTTCTGGCTGCATGTGTTGCATGTACGCTTCCTCATGTAGAAGCTGATTCAGGATTACAAACTCAAGTACAACATGAGCCAGGAGTTGCAACGTCCCCAACACGACATCCAATTTCCGCACACCAAGTTATGTACGAGCTTCGCATATATTCCCTTGAGGAGGCAACATTTGGAATGGTGCTTGCATCGCGGGCAATTAGAGCAGCTCACTGTCTGACTTCAATCCAGTTTTCACCCACATCTGAGCACATACTGCTTGCCTATGGCAGACGCCATGGATCTCTTCTTAAAAGCATTGTTATTGATGGAGAAACAACCCTACCCATATATACGGTGTTAGAGGTATACAGAGTGTCAGATATGAAACTCGTCATGGTGCTTCCTAGTGCAGAGGATGAAGTCAATGTAGCATGCTTTCATCCTTTTCCTGGGAGAGGGCTTGTTTATGGAACTAAGGAAGGAAAGCTTAGGTCAACTAACCAGCAAGGTTTAGAAGCATAA 2358 0.4529 MTGFPRPNDQTPPSSSSSRSSNSSGANVFNLLAHREISAKSKHVPKQHWGEASEPKAGSCPHPKNDAVRDSKRSLLSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDWETGSCLNVLIGHRRTPWVVRFHPLQPHILASGSLDQEVRLWDANTSKCILFHHFYRPIASIAFHAEGEILAIASGHKLYVWHYNKRGEGSSPTFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTRATSPGYLQYPPPAVIVANIHLKEHIAFPSNELPYLSLPFFFLPSFNADDSRVETHNASLVTGSENMQVESSPSALFQAVTNATEQYNNTVSPMDTVSEIPTTSQTGTEYAAHSTFSNGTGTGISSLAVDGMETDETVPAEGSQHGNTANVSSLSNVLHGLYRQATNHEGLSDLGQFQRFFASRDPSGWELPFLHGWLMGQSQVGVPLVLPHLSGSRDSLAQIGSSTMASNLSPHDDEATSSSSAIPGSMNMPGALGRSGLRSYFPQSQVPASESGNMASSVNIPHGVTDIQTIISRIQSELATSVAAAAAAELPCTVKLRVWSHDIKNPCAPLNAERCRLTIPHAVLCSEMGAHFSPCGRFLAACVACTLPHVEADSGLQTQVQHEPGVATSPTRHPISAHQVMYELRIYSLEEATFGMVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMKLVMVLPSAEDEVNVACFHPFPGRGLVYGTKEGKLRSTNQQGLEA 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1670 785 MobiDBLite consensus disorder prediction 485 507 - -
Alju01g1670 785 ProSitePatterns Trp-Asp (WD) repeats signature. 156 170 IPR019775 -
Alju01g1670 785 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 136 174 - -
Alju01g1670 785 SUPERFAMILY WD40 repeat-like 103 245 IPR036322 GO:0005515
Alju01g1670 785 Gene3D - 100 277 IPR015943 GO:0005515
Alju01g1670 785 MobiDBLite consensus disorder prediction 1 29 - -
Alju01g1670 785 Pfam WD domain, G-beta repeat 103 126 IPR001680 GO:0005515
Alju01g1670 785 Pfam WD domain, G-beta repeat 130 169 IPR001680 GO:0005515
Alju01g1670 785 MobiDBLite consensus disorder prediction 485 510 - -
Alju01g1670 785 SMART WD40_4 739 779 IPR001680 GO:0005515
Alju01g1670 785 SMART WD40_4 88 126 IPR001680 GO:0005515
Alju01g1670 785 SMART WD40_4 172 209 IPR001680 GO:0005515
Alju01g1670 785 SMART WD40_4 129 169 IPR001680 GO:0005515
Alju01g1670 785 MobiDBLite consensus disorder prediction 1 68 - -
Alju01g1670 785 ProSiteProfiles Trp-Asp (WD) repeats profile. 136 178 IPR001680 GO:0005515
Alju01g1670 785 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 22 780 - -
Alju01g1670 785 MobiDBLite consensus disorder prediction 36 50 - -
Alju01g1670 785 FunFam Activating molecule in BECN1-regulated autophagy protein 83 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1670 Alju-ChrAlju01 13394760 13401363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1670 89 242 Miscellaneous Gene Families AT5G08390 29.630 1.90e-07 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1670 01 13394760 13401363 Alju01g1670 01 13394760 13401363 ECH