Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1634 ATGGTGGGCATCTTCTCCTTAGTTACGGGGATGCCTGGTCCCAGTGGGTTTGGATCTGCTTCCACTGCTCAACAGGTTACTGAAGGAATTGATGCCACCGATCTCACTGCCATTGTTACAGGAGGAGCGAGTGGTATAGGATTGGAAACAGCAAGAGTCTTGGCTCTTCGAAATGCCCACGTCATCATTGCTGCGAGGAACATGGAGGCTGCAAAGGAAGCTAAACAGCTTATTCTGCTAGAAAATGAGTCTTCTCGAGTGGACATTCTCACGCTTGACCTCTGCTCAGTCAAATCCATCAGATCATTTGTTGACAATTTCTTGGCTCTTGATCTTCCTCTCAACATCTTGATAAACAATGCTGGTGTCATGTTCTGTCCCTTCCAACTCTCTGAGGATGGGATCGAAATGCAATTTGCTACTAATCATCTTGGTCATTTCCTGTTGACAAACCTCCTTCTTGACAAAATGAAGCAAACTGCAAAAGCAAGTGGAATCGAGGGCAGGATTGTCAATTTGTCATCAATTGCCCATACCTACACTTATGAAGAGGGTATTCGCTTTGATAAGATCAATGATCAAATTGGTTACTCGGACAAAAAGGCATATGGGCAGTCCAAGTTGGCCAATATATTGCATGCAAATGAGCTTTCTCGTCGCCTGCAGGAAGAGGGTGTGAACATTACGGCCAACTCAGTCCACCCAGGAGTTATAATGACCCCTCTCATGAGACATTCTTCCTTCCTTATGCGTTTTCTCAGGTTATTCACCTTTTACATATGGAAGAATGTCCCACAGGGAGCAGCCACAACATGTTACGTTGCTCTGCACCCGAGGGTGAAGGGTGTGAGTGGGAAGTACTTTCTGGATTGCAATGAGTTTGAACCAAGTGCTTTGGCCACTGACCAACTGTTAGGGAGGAAACTGTGGGATTTTAGCAACAAGTGGATCAACTCTATTTCTAAAGACTGA 972 0.4527 MVGIFSLVTGMPGPSGFGSASTAQQVTEGIDATDLTAIVTGGASGIGLETARVLALRNAHVIIAARNMEAAKEAKQLILLENESSRVDILTLDLCSVKSIRSFVDNFLALDLPLNILINNAGVMFCPFQLSEDGIEMQFATNHLGHFLLTNLLLDKMKQTAKASGIEGRIVNLSSIAHTYTYEEGIRFDKINDQIGYSDKKAYGQSKLANILHANELSRRLQEEGVNITANSVHPGVIMTPLMRHSSFLMRFLRLFTFYIWKNVPQGAATTCYVALHPRVKGVSGKYFLDCNEFEPSALATDQLLGRKLWDFSNKWINSISKD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1634 323 PANTHER RETINOL DEHYDROGENASE 14 317 - -
Alju01g1634 323 Gene3D - 25 320 - -
Alju01g1634 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 295 IPR036291 -
Alju01g1634 323 Pfam short chain dehydrogenase 36 183 IPR002347 -
Alju01g1634 323 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Alju01g1634 323 PRINTS Glucose/ribitol dehydrogenase family signature 226 243 IPR002347 -
Alju01g1634 323 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Alju01g1634 323 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Alju01g1634 323 CDD retinol-DH_like_SDR_c_like 36 310 - -
Alju01g1634 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Alju01g1634 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Alju01g1634 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1634 Alju-ChrAlju01 13132000 13134617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1634 35 244 Miscellaneous Gene Families AT2G29340 29.108 3.38e-09 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1634 01 13132000 13134617 Alju03g2721 03 53101569 53102848 CCT
Alju01g1634 01 13132000 13134617 Alju01g1634 01 13132000 13134617 ECH