Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1599 ATGGATCTCAAAAAACCAATCGCCGTCAGCACTCCCTCCGAACCCCCCACGCCCACCACCCCTCGTCCCACCCTCTTCCTCTCCTCTTCCGGCAACGCCCTCCTCGTTTCTAACTCCGGTAAATCCCTCCAGGTTTCCTATTCCAACAAATCCATTCTCTCCAATTCCGGCAAGCGCTTCGACAAGAAGAAGTACGTCAAGCAGGTCACCGGCCGCCACAACGACACCGAGCTTCACCTCGCCGCCCAGCGTGGGGACGTCGCCTCCATTAGCTACATTTTGGGAGAAATCGATGGCCAGAAGATCGGAACCCCTAGTGGGGCCGATTTCGATGCCGAGCTCGAGGAGATTAGGTCCGCCATTGTCAATGAGGTCAACGAATTGGGGGAGACGCCTTTGTTTGTGGCGGCCGAGCGGGGCCACATTGACGTTGTGAAGGAGCTTCTGCCCCATGCCACCAAAGAGGCCCTTTCCTTCAAAAATCAATCTGGCTTCGATCCCTTACATATTGCTGCTAGCCAAGGTCACCTAGCCATTGTTCAGGTCTTACTAGACCATGATCCAGCGCTAATAAATACATTTGGACAATCAAATGCAACTCCTCTCATATCAGCAGCTACAAAAGGGCATGCAGATGTTGTTGATCTGTTGTTATCACGAGATCCTACACAGGTGGAGTTATCTAGGTCCAATGGAAAGAATGTACTGCATTTTGCTGCTCGTCAGGGACATGCTTTTATTGTAAAATCATTACTCGAAAAGGCTCCACAACTTACTCGAAGGACTGATAAGAAAGGGCAGACTCCCCTGCATATGGCTGTAAAGGGGGTTAGCTGTGAAGTGGTGAGGTTGCTTCTTAATGCAGATCCAGCAACTGTTGCGTTACCTGACAAGTTTAGCAATACTGCATTACATATTGCCACCAGGAAGAAGAGGGCAGAGATAGTGAGTGAACTATTACTTCATCCTGAAACCAACGTTAATGCCCTGACAAGAGACCGTAAAACATCTCTTGACATTGCCGAAGGACTCCCTCCTTCTGAAGAAATCCTAGAGATAAAAGATTGCCTGGTTCAAAGTGGCGGAGTTAAGGCCAATGATCTTAACCAACCAAGGGATGAGCTAAGGAAAACTGTGACACAGATTAGGAAGGAGGTCCATATTCAGCTTGAACAAACTCGAGAAACAAACAAAAACGTGGATGGGATTGCCAAGGAGCTACGCAAACTGCACAGAGCGGGGATCAACAATGCTACCAACTCAGTTACAGTGGTTGCTTCACTCTTTGCAACAGTTGCATTCTCTGCAATTTTTGCAGTTCCTGGTGGGGATTTTGATAGTGGGCTGGCCGTTATGGTGTCCCATCCACCTTTCAAGATCTTCTTTATTTCTAATGCAATTGCACTCTTCACATCATTGGCTGTTGTCGTGGTTCAGATCACAGTTGTTAGAGGGGAGGCAAAGTCTGAAAGAAGGGTTGTGAGAGTGATTAATAAGCTGATGTGGTTGGCCTCTATTTGTACCACGATCGCTTTCATTTCATCATCTTATATAGTTGTTGGTCGACGTAGCATATGGGCTGCAATCTTTGTTACTGTGGTAGGGGGAGTTGTGATGGCGGGTGTTCTTGGTGCTATGACATACTATGTGCTTAAGTACAAACGTATTCGGAGGGTGAGAAAGAAAGCCAAATTAGCCAGGAAACATTCAGTGCACCATTCGGATTCTGATTCAGAAGTAAATCCGATTTATGCCATTTGA 1761 0.4736 MDLKKPIAVSTPSEPPTPTTPRPTLFLSSSGNALLVSNSGKSLQVSYSNKSILSNSGKRFDKKKYVKQVTGRHNDTELHLAAQRGDVASISYILGEIDGQKIGTPSGADFDAELEEIRSAIVNEVNELGETPLFVAAERGHIDVVKELLPHATKEALSFKNQSGFDPLHIAASQGHLAIVQVLLDHDPALINTFGQSNATPLISAATKGHADVVDLLLSRDPTQVELSRSNGKNVLHFAARQGHAFIVKSLLEKAPQLTRRTDKKGQTPLHMAVKGVSCEVVRLLLNADPATVALPDKFSNTALHIATRKKRAEIVSELLLHPETNVNALTRDRKTSLDIAEGLPPSEEILEIKDCLVQSGGVKANDLNQPRDELRKTVTQIRKEVHIQLEQTRETNKNVDGIAKELRKLHRAGINNATNSVTVVASLFATVAFSAIFAVPGGDFDSGLAVMVSHPPFKIFFISNAIALFTSLAVVVVQITVVRGEAKSERRVVRVINKLMWLASICTTIAFISSSYIVVGRRSIWAAIFVTVVGGVVMAGVLGAMTYYVLKYKRIRRVRKKAKLARKHSVHHSDSDSEVNPIYAI 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1599 586 SUPERFAMILY Ankyrin repeat 75 342 IPR036770 -
Alju01g1599 586 ProSiteProfiles Ankyrin repeat profile. 265 287 IPR002110 GO:0005515
Alju01g1599 586 Pfam Domain of unknown function 415 519 IPR026961 -
Alju01g1599 586 FunFam Ankyrin repeat-containing protein ITN1 224 344 - -
Alju01g1599 586 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 51 569 - -
Alju01g1599 586 MobiDBLite consensus disorder prediction 1 22 - -
Alju01g1599 586 FunFam Ankyrin repeat-containing protein ITN1 50 189 - -
Alju01g1599 586 ProSiteProfiles Ankyrin repeat region circular profile. 163 186 - -
Alju01g1599 586 ProSiteProfiles Ankyrin repeat region circular profile. 231 254 - -
Alju01g1599 586 Pfam Ankyrin repeat 301 331 IPR002110 GO:0005515
Alju01g1599 586 ProSiteProfiles Ankyrin repeat profile. 231 263 IPR002110 GO:0005515
Alju01g1599 586 ProSiteProfiles Ankyrin repeat profile. 163 186 IPR002110 GO:0005515
Alju01g1599 586 Pfam Ankyrin repeats (3 copies) 78 186 IPR002110 GO:0005515
Alju01g1599 586 Pfam Ankyrin repeats (3 copies) 228 290 IPR002110 GO:0005515
Alju01g1599 586 MobiDBLite consensus disorder prediction 567 586 - -
Alju01g1599 586 ProSiteProfiles Ankyrin repeat profile. 299 332 IPR002110 GO:0005515
Alju01g1599 586 ProSiteProfiles Ankyrin repeat region circular profile. 265 287 - -
Alju01g1599 586 ProSiteProfiles Ankyrin repeat region circular profile. 128 149 - -
Alju01g1599 586 Gene3D - 224 381 IPR036770 -
Alju01g1599 586 ProSiteProfiles Ankyrin repeat profile. 128 149 IPR002110 GO:0005515
Alju01g1599 586 Gene3D - 43 223 IPR036770 -
Alju01g1599 586 SMART ANK_2a 128 156 IPR002110 GO:0005515
Alju01g1599 586 SMART ANK_2a 265 295 IPR002110 GO:0005515
Alju01g1599 586 SMART ANK_2a 163 193 IPR002110 GO:0005515
Alju01g1599 586 SMART ANK_2a 197 227 IPR002110 GO:0005515
Alju01g1599 586 SMART ANK_2a 299 329 IPR002110 GO:0005515
Alju01g1599 586 SMART ANK_2a 73 102 IPR002110 GO:0005515
Alju01g1599 586 SMART ANK_2a 231 260 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1599 Alju-ChrAlju01 12805334 12807701 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1599 2 586 Miscellaneous Gene Families AT3G09550 70.756 0.0 800
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1599 01 12805334 12807701 Alju01g1599 01 12805334 12807701 ECH