Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1581 ATGGCGGACTTCGGTTTCAGTCTCCTCCACAATGTTGAACCCATGAGTATGTTGTTGTCCTTACTGAGTAAGCGTTCATTGGAGGTTGATTCTAGGGATTCCTACGGATTTGCATTAAGACCTCAACACGCACAAAGTTACAGACAGTATGCTTCTATCTACAAGGAGGAGGAAGGTGAAAGGGCAGATAAATGGAGAGGCTTCCTTGAACAGATAGTCCAATCATCTCAATCATGTTCTTCTGAGAATAAACTCGAAGAAATATCTGAAGCTAAGGGTAGTGAGATTAATGAAAAGACAAGTTCAGGGAGCTTAAGTGAAGGAAATGGTTTCAGTATCAGGAAGTCTTGTGAAGGGACTGGGATAGAAGAAGAGACAAGTGCTGAGAGGGTAAGTGAAGGACATGATTTGAGTTTGGAGAAATCTTGTGAAGGGACTAAGGTAGAAGACGAGACAGGTGCAGAGTTGGTAAGTGAAGGAAATGATTTGAGTGGCAGGAAGTCTTTTAAAGGTACTGAAATAGAGGAAGGGACAAATCTAGAGAGGCAAAGAGAGGCATATGAGTTAATTGACAGGAGGGCTGCTGAAGTTGCTGAGATTAAAGAAGGGAAAGAAGGGACAGTTCCAGCAAGAGTTAGTGAAGGGAACGATTCAATTGGCAAGAAGTCTCTTTCTGATGGCTCAACAGCAAGTAGTTCTGAAAAAGAGGTGCACTGTCCAGAAGAAAGAAATGACCGAAAGGTTAAAACCTGGGGTGAAATTAGGCCTTCTGTTGCTGCCATTGAGAAACTGATGAGTAATCGCGTCAAGAAGGCAAAGAAAATTGAAGTTGAGCAGACAAATGGTAAATATGATAATCTTCCATCTATAGAAGAGTCTGAACGTCTAGAAGTGGTTTCTGAGGAAATCGTTGGGGAAAAGATCTGCACTAAAGAGATGCTAGATAACAGTATCAATGACTCGAGGGAAGGAAATGCTTTAGAGGATCATGAGTCACCTGAATCTTACTCTCAGCTGAAGGAATTGGAGACCCTAGTTCAGGGAGGAGTGCCAAAGGATCTCAGAGGAGAGGTATGGCAAGCATTTCTAGGAGTGAAGACACGTAGGGTTAAAAGCTATTACGAGGATCTATTGGCTCAAGAAACTGATAGTAGTGAAATGAAGGAGCAGGATGATCCATCTGGTGCATTAGGGAAATGGACAAAGCAGATTGAGAAGGACATACCGCGAACTTTCCCAGCACATCCTGCTTTGGATGAAAATGGCAGGAATTCCTTAAGGCGTTTACTCATAGCATATGCTCGGCACAATCCCTCTGTTGGTTACTGTCAGGCAATGAACTTCTTTGCTGGTTTGTTGCTTCTTCTTATGCCTGAGGAAAATGCATTTTGGGCATTGGTGGGCATTATTGATGATTATTTTGAAGGTTATTATACAGAGGAAATGGTAGAATCCCAGGTAGACCAGCTTGTGTTTGAGGAATTAATGCGTGAAAGATTTCCCAAGCTGGTTAATCATCTGGATTACTTGGGAGTGCAGGTGGCTTGGATAACTGGACCTTGGTTCCTATCAATCTTTGTAAACATGATTCCTTGGGAAAGTGTTCTTCGAGTTTGGGATGTGTTACTATTTGAAGGGAACCGTGTAATGCTATTTCGAACAGCCCTTGCTCTAATGGATTTATATGGTCCTGCATTAGTTACAACAAAAGATGCAGGTGATGCAATTACTCTATTGCAATCACTTGCCGGCTCAACATTTGATAGCAGTCAGCTCGTCTTTACCGCTTGTGTAAGTTTTCTAGCTGTGTCTGAGGCTAGATTGCAGGAACTGAGAGAAAAGCATCGGCCATCTGTACTGGTTGTTGTGGAGGAAAGGTCTAAAAAGGGGCGAATTTGGAAGGATTCCAAAGGGCTTGCATCTAAACTGTACAGTTTCAAGCATGACCCAGGATCACTGGTAGAGGAAATGAAAACCAATGAAGGAGATGATATGGAAAATGTTGGGGACAAATCACAGTTGCAATCCCATTCCTCCAACTTGGATGAGCTTCTCAATAGCCTCAATGTTGATTCAGAAGTAGATTCCCTTCCAGATCTCCAGGAACAGGTGGTTTGGTTGAAGGTCGAGTTATGCAGAATGCTAGAGGAGAAAAGATCTGCTATAATCAGAGCTGAGGAGCTAGAAACAGCGCTGATGGAGATGGTCAAGCAAGATAATCGACGGGAACTGAGTGCCAGGGTTGAGCAATTAGAGCGGGAGGTCGCTGAGCTACAACAAGCCCTTGCTGATAAGAAATTACAAGAAACTGCCATGCTGCAGGTCCTAATCAGGGTAGAGCAGGAGCAAAAGGTTACCGAAGATGCTCGTAGAAGAGCTGAGCAAGACCTTGCTGCTCAGAAATATGTAGTTCATATGCTTCAGGAAAATTATGATAAAGCCATGGCATCGATCAAAGAGATGGAAAAGCGTGTTCTTATGGCTGAAAGCATGTTAGAGGCCACCCTTCAATATGAATCTGGCCAATCGAAAGCACTTTCTCCAAGGGGTGATCGGGTACCAAGCCCAAGAATTGAAATACCACCGCCAAAGTTGCGTCTACTAAATTTTGGACTAGGTTGGCGTGAAAGAAGCAAGGGCAAGCCAACTAACGAAGAGGAATGCAGCCAAAGTCAGTCTAATGACCAGAGCGAAAGTCGTTCTAACAACGAGGACACTGTCACTTCCGGCAGGGAATTCCATGACTAA 2748 0.4356 MADFGFSLLHNVEPMSMLLSLLSKRSLEVDSRDSYGFALRPQHAQSYRQYASIYKEEEGERADKWRGFLEQIVQSSQSCSSENKLEEISEAKGSEINEKTSSGSLSEGNGFSIRKSCEGTGIEEETSAERVSEGHDLSLEKSCEGTKVEDETGAELVSEGNDLSGRKSFKGTEIEEGTNLERQREAYELIDRRAAEVAEIKEGKEGTVPARVSEGNDSIGKKSLSDGSTASSSEKEVHCPEERNDRKVKTWGEIRPSVAAIEKLMSNRVKKAKKIEVEQTNGKYDNLPSIEESERLEVVSEEIVGEKICTKEMLDNSINDSREGNALEDHESPESYSQLKELETLVQGGVPKDLRGEVWQAFLGVKTRRVKSYYEDLLAQETDSSEMKEQDDPSGALGKWTKQIEKDIPRTFPAHPALDENGRNSLRRLLIAYARHNPSVGYCQAMNFFAGLLLLLMPEENAFWALVGIIDDYFEGYYTEEMVESQVDQLVFEELMRERFPKLVNHLDYLGVQVAWITGPWFLSIFVNMIPWESVLRVWDVLLFEGNRVMLFRTALALMDLYGPALVTTKDAGDAITLLQSLAGSTFDSSQLVFTACVSFLAVSEARLQELREKHRPSVLVVVEERSKKGRIWKDSKGLASKLYSFKHDPGSLVEEMKTNEGDDMENVGDKSQLQSHSSNLDELLNSLNVDSEVDSLPDLQEQVVWLKVELCRMLEEKRSAIIRAEELETALMEMVKQDNRRELSARVEQLEREVAELQQALADKKLQETAMLQVLIRVEQEQKVTEDARRRAEQDLAAQKYVVHMLQENYDKAMASIKEMEKRVLMAESMLEATLQYESGQSKALSPRGDRVPSPRIEIPPPKLRLLNFGLGWRERSKGKPTNEEECSQSQSNDQSESRSNNEDTVTSGREFHD 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1581 915 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 486 597 IPR035969 -
Alju01g1581 915 SMART tbc_4 346 570 IPR000195 -
Alju01g1581 915 MobiDBLite consensus disorder prediction 218 234 - -
Alju01g1581 915 FunFam Ypt/Rab-GAP domain of gyp1p superfamily protein 378 476 - -
Alju01g1581 915 Coils Coil 804 824 - -
Alju01g1581 915 Gene3D - 477 617 - -
Alju01g1581 915 MobiDBLite consensus disorder prediction 80 112 - -
Alju01g1581 915 MobiDBLite consensus disorder prediction 885 904 - -
Alju01g1581 915 Gene3D - 324 364 - -
Alju01g1581 915 ProSiteProfiles TBC/rab GAP domain profile. 349 546 IPR000195 -
Alju01g1581 915 MobiDBLite consensus disorder prediction 204 244 - -
Alju01g1581 915 MobiDBLite consensus disorder prediction 839 915 - -
Alju01g1581 915 PANTHER RAB GTPASE-ACTIVATING PROTEIN 1-LIKE 189 829 - -
Alju01g1581 915 MobiDBLite consensus disorder prediction 95 112 - -
Alju01g1581 915 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 337 506 IPR035969 -
Alju01g1581 915 Coils Coil 776 796 - -
Alju01g1581 915 Pfam Rab-GTPase-TBC domain 353 563 IPR000195 -
Alju01g1581 915 Coils Coil 734 768 - -
Alju01g1581 915 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 366 476 - -
Alju01g1581 915 MobiDBLite consensus disorder prediction 157 177 - -
Alju01g1581 915 FunFam TBC1 domain family member 8B 477 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1581 Alju-ChrAlju01 12701505 12709834 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1581 01 12701505 12709834 Alju01g1581 01 12701505 12709834 ECH