Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1327 ATGCAAGGTGGCCTCGTAGAGATAAAACCAGGGGTCCACACGTACGTTGCTCAGTGGCCAATCTATGCTCTGGCATGGTCATCACGTCGCGACAAAAATCCCCGCCTTGCCATAGGTAGTTACATAGAACACCACATGAACAAGGTCGAACTCGTTCACTTCAACCACGAGACATCAAATTACAGGACCGACCCTAATCTTGTGCTGGACCATCCTTATGCTCCAACAAACATCATGTTCTTCCCCTCCGAGGACGACATGAATCCCGACATCATCGCCACCTCCGGAGACTACCTAAGACTATGGGAAATACACGAGGATCGGATTGAGCTCAAGTCCCTCCTAACTGGCAACAAAGTCCGAGATAACTCAGCCATAACCTCGTTTGACTGGGCAGAGTTTGACCCTCGTCGTTTGGCTGCTTCCAGCGTGGATACCACGTGCACCATATGGGATATTGAGAAGGAATCTTTGGACACACAATTAGTGGCACATGACAAGGAAGTGTACGACATATCATGGGGTGGGTTTAACGTGTTTGCTTCAGTGTCTGGGGATGGTTCCGTGAGAGTTTTTGACTTGAGGGACAAAGAAAGATCGACCATAATATTTGAGAACCCAATCCAAGATTGTCCTCTGTTACGCTTGGAATGGAATAAAGGGGATCCAAGATTTATGGCCACGGTCGGAATGGACAGTAATAAAGTGGTAATAATGGATATTAGGCAACCAACCACGCCGGTTATGGAACTAAATAAGCAAAAGGCAAGCGTTAATGCTATATCGTGGTCCCCACATATGGGACGTCGGCTTTGCTCTTGTGGCGATGATTCCAGGGCTTTGATTTGGGACGTGGTGGGAACTATTGGGTCTCAACCAAGGATTAATGGTGGTGATGACGTGAAGCCAGATTTGTGTTATGAAACAACGGCTGAGATCAATCAAGTGCGGTGGTCTCCTGTTCAGATTGACTGGATTGCCCTTGCTTCCGCGAATACGCTACAGCTTTTGAAGGTGTAG 1020 0.4775 MQGGLVEIKPGVHTYVAQWPIYALAWSSRRDKNPRLAIGSYIEHHMNKVELVHFNHETSNYRTDPNLVLDHPYAPTNIMFFPSEDDMNPDIIATSGDYLRLWEIHEDRIELKSLLTGNKVRDNSAITSFDWAEFDPRRLAASSVDTTCTIWDIEKESLDTQLVAHDKEVYDISWGGFNVFASVSGDGSVRVFDLRDKERSTIIFENPIQDCPLLRLEWNKGDPRFMATVGMDSNKVVIMDIRQPTTPVMELNKQKASVNAISWSPHMGRRLCSCGDDSRALIWDVVGTIGSQPRINGGDDVKPDLCYETTAEINQVRWSPVQIDWIALASANTLQLLKV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1327 339 PANTHER WD REPEAT CONTAINING PROTEIN 10 339 IPR045159 -
Alju01g1327 339 ProSitePatterns Trp-Asp (WD) repeats signature. 271 285 IPR019775 -
Alju01g1327 339 Gene3D - 11 339 IPR015943 GO:0005515
Alju01g1327 339 Pfam WD domain, G-beta repeat 162 193 IPR001680 GO:0005515
Alju01g1327 339 ProSiteProfiles Trp-Asp (WD) repeats profile. 162 202 IPR001680 GO:0005515
Alju01g1327 339 SMART WD40_4 155 193 IPR001680 GO:0005515
Alju01g1327 339 SMART WD40_4 244 284 IPR001680 GO:0005515
Alju01g1327 339 SMART WD40_4 116 152 IPR001680 GO:0005515
Alju01g1327 339 ProSiteProfiles Trp-Asp (WD) repeats profile. 251 285 IPR001680 GO:0005515
Alju01g1327 339 SUPERFAMILY WD40 repeat-like 16 332 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1327 Alju-ChrAlju01 10489189 10490208 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1327 01 10489189 10490208 Alju01g1327 01 10489189 10490208 ECH