Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1326 ATGGAAAACAGTGCAGGGAATGGGAAAGAAAAGGAATTGATGGGAGAAAATGGTTTCTTGAAAGTGCCGCAACCTTCTATTAGTAGTAGTGGCCCTGGTGGGGATATTGATCCTGTAAATAAGAGAGGTGAAGGGAAAGATAATCTTTCGTATGCCAACATCCTACGTTCAAGGAACAAATTTGTTGATGCTCTTGCTTTATACGATCGTGTACTTGAGAATGATAGTGGAAATGTAGAGGCTTTAATTGGAAAAGGGATATGCCTGCAAATGCAGAATATGGGGAGGCTTGCTTTTGAAAGTTTTGCTGAGGCTATCAAGTTGGACCCTCATAATGCTTGCGCACTTACGCATTGTGGTATTTTGTACAAAGAAGAAGGTCGTTTGATGGAGGCAGCTGAGTCGTATCAGAAGGCTTTACAAGTGGATCCTTCATACAAAGCAGCTTCTGAATGCCTCGCCATTGTTTTAACAGATATCGGTACCAACATAAAACTTGCGGGAAACACTCAAGAGGGAATTCAAAAATATTATGAAGCTCTCAAAATAGATACTCACTATGCTCCGGCATATTATAACCTTGGTGTTGTCTATTCTGAAATGATGCAATATGAAATGGCCCTTAGTTTCTATGAGAAGGCTGCATCAGAGAGGCCAATGTATGCGGAAGCATATTGCAATATGGGTGTGATTTATAAAAATCGTGGTGATTTGGAAGCAGCTATTGCTTGCTACGAGAGATGCTTAGCTGTTTCACCTAACTTTGAGATTGCAAAGAATAATATGGCTATAGCCTTGACTGATTTGGGAACAAAGGTTAAATTGGAAGGGGACATCAATCAAGGGGTGGCTTATTATAAGAAAGCCTTGTATTATAATTGGCATTATGCTGATGCTATGTATAATCTCGGGGTTGCCTATGGTGAGATGCTTAAGTTTGACATGGCTATTGTGTTCTATGAACTTGCTTTTCACTTCAATCCTCATTGTGCGGAAGCATGTAACAATCTTGGGGTTATATATAAAGATAAAGACAACCTTGATAAAGCTGTAGAGTGTTACCAGCTTGCATTGTCAATCAAACCTAATTTCTCACAATCATTGAATAATCTTGGTGTTGTCTATACTGTCCAGGGTAAAATTGACGCTGCTGCAAGTATGATTGAGAAAGCTATCATTGCAAATCCAACATACGCAGAAGCATACAATAATTTAGGAGTTCTTTATAGGGATATTGGTGATATCACTCTGGCGGTTAATGCTTATGAGCAATGTCTTAAGATAGATCCTGACTCTCGAAATGCTGGCCAGAACCGATTGCTTGCAATGAATTACATAGATGAAGGCCATGATGATAAACTTTTTGAAGCTCACAGGGACTGGGGCTGGCGCTTCATGAGATTATATTCACAGTACTCAACATGGGATAACCCCAAAGATCCTGAGCGACCTCTTGTCATAGGATATGTATCTCCTGATTATTTCACTCATTCTGTGTCTTACTTCATAGAGGCTCCCCTTGTCTATCATGACTACACCAATTATAAAGTCATAGTTTATTCGGCAGTTGTCAAGGCAGATGCAAAAACAATAAAATTTAGAGAGAAAGTTCTACAGAAGGGTGGGATTTGGAGAGATATATATGGGATTGATGAAAAGAGGGTTGCCAACATGGTCAGAGAAGACCAGGTTGACATTCTGGTAGAACTCACTGGTCATACTGCAAATAACAAGTTGGGAATGATGGCATGTCGGCCTGCACCAGTTCAGGTGACTTGGATTGGTTATCCTAATACAACAGGCTTACCTGCAATTGATTATAGAATTACTGATTCGCTGGCAGACCCTCCTGACACAAAGCAGAAGCATGTTGAGGAGTTAGTTCGGTTACCAGAATGCTTCCTCTGTTACACGCCTTCCCTTGAGGCCGGGCCTGTTTGTCCTACTCCTGCTCTTTCTAATGGCTTCGTTACATTTGGTAGCTTCAACAATCTTGCCAAGATCACACCTAAAGTATTGCAAGTTTGGGCAAGGATATTACGTCAAGTTCCAAATTCACGCCTTGTGGTAAAATGTAAACCGTTTTGTTGTGATAGTGTAAGACAGAGATTTCTCACAGCATTGGAGCAGTTAGGTGTGGAACCACTATGTGTTGATCTTCTACCCCTTATTCTTCTTAATCATGACCATATGCAAGCATATTCTCTGATGGATATCAGTTTGGACACATTTCCGTATGCTGGAACAACCACAACGTGTGAATCTTTATACATGGGAGTTCCATGCGTCACTATGGCTGGTTCTGTACATGCACACAATGTTGGTGTTAGCCTTCTTAGCAAAGTTGGTCTGGAGCGTTTGGTTGCCAGAAATGAAGATGAATACGTCCAATTGGCTCTGCAGCTGGCCTCTGACATACCAGCCCTGCAAAATTTGAGGATGAGTCTTCGAGAACTCATGTCCAAGTCTCCTATCTGTGATGGGGCGAATTTTGCCCTTGGCTTGGAATCAACATTTAGGAACATGTGGCGCAGATATTGTAAAGGAGATGTTCCATCTTTAAAGCGCATGGAATTCTTGCAGCAAGCAGCCACAATGAGTGACCCATCTAATAAGACATCAGAATCAACAAGGATGGCCAACTCAATAGAGAGCAGCCCAGGATCTGTCAAGACCAGTGAATTGAATTCATCACAACCATCTAAGCTCAATACACGCAGCTGCGAAGAAAATGGGGGTTCATTGAATCACTCTAGTAAACAAGGAAAGGGGGGTTCTAGTTAA 2784 0.4142 MENSAGNGKEKELMGENGFLKVPQPSISSSGPGGDIDPVNKRGEGKDNLSYANILRSRNKFVDALALYDRVLENDSGNVEALIGKGICLQMQNMGRLAFESFAEAIKLDPHNACALTHCGILYKEEGRLMEAAESYQKALQVDPSYKAASECLAIVLTDIGTNIKLAGNTQEGIQKYYEALKIDTHYAPAYYNLGVVYSEMMQYEMALSFYEKAASERPMYAEAYCNMGVIYKNRGDLEAAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDKDNLDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKIDAAASMIEKAIIANPTYAEAYNNLGVLYRDIGDITLAVNAYEQCLKIDPDSRNAGQNRLLAMNYIDEGHDDKLFEAHRDWGWRFMRLYSQYSTWDNPKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYTNYKVIVYSAVVKADAKTIKFREKVLQKGGIWRDIYGIDEKRVANMVREDQVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNTTGLPAIDYRITDSLADPPDTKQKHVEELVRLPECFLCYTPSLEAGPVCPTPALSNGFVTFGSFNNLAKITPKVLQVWARILRQVPNSRLVVKCKPFCCDSVRQRFLTALEQLGVEPLCVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLSKVGLERLVARNEDEYVQLALQLASDIPALQNLRMSLRELMSKSPICDGANFALGLESTFRNMWRRYCKGDVPSLKRMEFLQQAATMSDPSNKTSESTRMANSIESSPGSVKTSELNSSQPSKLNTRSCEENGGSLNHSSKQGKGGSS 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1326 927 Gene3D - 470 640 - -
Alju01g1326 927 Gene3D Glycogen Phosphorylase B; 641 826 - -
Alju01g1326 927 Gene3D Tetratricopeptide repeat domain 270 370 IPR011990 GO:0005515
Alju01g1326 927 ProSiteProfiles TPR repeat profile. 113 146 IPR019734 GO:0005515
Alju01g1326 927 Gene3D Tetratricopeptide repeat domain 371 458 IPR011990 GO:0005515
Alju01g1326 927 Gene3D Tetratricopeptide repeat domain 158 269 IPR011990 GO:0005515
Alju01g1326 927 PANTHER UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED 38 865 - -
Alju01g1326 927 ProSiteProfiles TPR repeat region circular profile. 222 254 - -
Alju01g1326 927 MobiDBLite consensus disorder prediction 1 44 - -
Alju01g1326 927 ProSiteProfiles TPR repeat profile. 188 221 IPR019734 GO:0005515
Alju01g1326 927 ProSiteProfiles TPR repeat profile. 222 255 IPR019734 GO:0005515
Alju01g1326 927 MobiDBLite consensus disorder prediction 863 927 - -
Alju01g1326 927 FunFam probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 263 461 - -
Alju01g1326 927 SUPERFAMILY TPR-like 263 798 IPR011990 GO:0005515
Alju01g1326 927 ProSiteProfiles TPR repeat profile. 331 364 IPR019734 GO:0005515
Alju01g1326 927 Pfam Tetratricopeptide repeat 120 145 IPR019734 GO:0005515
Alju01g1326 927 ProSiteProfiles TPR repeat profile. 365 398 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 79 112 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 154 187 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 222 255 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 263 296 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 365 398 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 188 221 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 45 78 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 399 432 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 297 330 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 331 364 IPR019734 GO:0005515
Alju01g1326 927 SMART tpr_5 113 146 IPR019734 GO:0005515
Alju01g1326 927 SMART sel1 222 253 IPR006597 -
Alju01g1326 927 SMART sel1 331 362 IPR006597 -
Alju01g1326 927 SMART sel1 399 430 IPR006597 -
Alju01g1326 927 SMART sel1 188 219 IPR006597 -
Alju01g1326 927 SMART sel1 297 328 IPR006597 -
Alju01g1326 927 Gene3D Tetratricopeptide repeat domain 46 157 IPR011990 GO:0005515
Alju01g1326 927 ProSiteProfiles TPR repeat region circular profile. 331 363 - -
Alju01g1326 927 ProSiteProfiles TPR repeat region circular profile. 113 145 - -
Alju01g1326 927 ProSiteProfiles TPR repeat profile. 297 330 IPR019734 GO:0005515
Alju01g1326 927 ProSiteProfiles TPR repeat region circular profile. 399 431 - -
Alju01g1326 927 ProSiteProfiles TPR repeat profile. 399 432 IPR019734 GO:0005515
Alju01g1326 927 Pfam Tetratricopeptide repeat 367 392 - -
Alju01g1326 927 Pfam Tetratricopeptide repeat 188 219 IPR001440 GO:0005515
Alju01g1326 927 Pfam Tetratricopeptide repeat 331 364 IPR001440 GO:0005515
Alju01g1326 927 Pfam Tetratricopeptide repeat 222 255 IPR001440 GO:0005515
Alju01g1326 927 Pfam Tetratricopeptide repeat 399 431 IPR001440 GO:0005515
Alju01g1326 927 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Alju01g1326 927 SUPERFAMILY TPR-like 46 271 IPR011990 GO:0005515
Alju01g1326 927 Pfam Glycosyl transferase family 41 479 635 IPR029489 -
Alju01g1326 927 Pfam Glycosyl transferase family 41 652 831 IPR029489 -
Alju01g1326 927 ProSiteProfiles TPR repeat region circular profile. 188 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1326 Alju-ChrAlju01 10463235 10472652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1326 203 907 Glycosyltransferase AT3G11540 63.121 0.0 892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1326 01 10463235 10472652 Alju01g1326 01 10463235 10472652 ECH