Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1314 ATGGTGAAGGACAGGCTGGCAGGGAAAGTAGCACTTGTAACCGGAGGAGCCAGCGGGATCGGCAAACGCACCGCCCAAGTGTTCGCCCAGCAGGGAGCCAAGGTGGTAATCGCGGACCTTCAAGATGACTTGGGTCAGTCCGTGGCCCAGTCGATGGGCCCATCAGACGGCCTATACGTCCACTGCGACGTCACCGATGAGGCCCAGGTCAAAAACGCCGTGGACATGGCCGTCAAAACCTTCGGGAAACTCGACGTCATGTTCAACAACGCAGGCATAGCGGATCCAAACAAGGACCGAATCATAGACAACGAGAAGGCCGACTTCGAGCTCGTGCTGAGCGTGAACGTCACCGGCGTCTTCCTGGGAATCAAGCACGCGGCGCAGGCCATGATTCCTGCTCGCAGCGGAAGCATAATATCGACCGCGAGCATAAGCTCGTACGTGGGAGGGGCTGCTTCCTACGCGTACACCTGTTCCAAGCATGCGGTGGTTGGGCTGACTAAGAATGCGGCGGTAGAGTTAGGGCAGTTTGGGATAAGAGTGAACTGTTTATCGCCCTACGCCATGGCCACGCCGTTAGCTACCAAGTTTGTTGGGCTCAACGATGAAGAGCTTGAGAATACCATGAACTGCCTTGCTAATCTGAAGGGCGTGACCCTAAAAGTTGATGATGTGGCCAATGCAGCGCTTTATATGGCTAGTGATGAATCTAGGTATGTGAGTGGCCAAAATTTGCTCATCGATGGCGGTTTCAGTATTGTTAACCCCTCCTTTAAGATGTTTCAGTACCCTCCTGAGTCTTAG 807 0.5428 MVKDRLAGKVALVTGGASGIGKRTAQVFAQQGAKVVIADLQDDLGQSVAQSMGPSDGLYVHCDVTDEAQVKNAVDMAVKTFGKLDVMFNNAGIADPNKDRIIDNEKADFELVLSVNVTGVFLGIKHAAQAMIPARSGSIISTASISSYVGGAASYAYTCSKHAVVGLTKNAAVELGQFGIRVNCLSPYAMATPLATKFVGLNDEELENTMNCLANLKGVTLKVDDVANAALYMASDESRYVSGQNLLIDGGFSIVNPSFKMFQYPPES 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1314 268 Gene3D - 2 263 - -
Alju01g1314 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Alju01g1314 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Alju01g1314 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Alju01g1314 268 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 4 256 - -
Alju01g1314 268 FunFam Short-chain dehydrogenase reductase 1 257 - -
Alju01g1314 268 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Alju01g1314 268 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 255 IPR036291 -
Alju01g1314 268 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 144 172 IPR020904 GO:0016491
Alju01g1314 268 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Alju01g1314 268 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Alju01g1314 268 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Alju01g1314 268 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Alju01g1314 268 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Alju01g1314 268 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1314 Alju-ChrAlju01 10330544 10331350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1314 6 262 Acyl Lipid Metabolism Gene Families AT1G63380 31.734 1.07e-27 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1314 01 10330544 10331350 Alju01g1314 01 10330544 10331350 ECH