Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1310 ATGGAGTTCTGTCTCCTACCCCGGAGAATCCCATATTTTCGTCAGATCCATCACATTTACGCGAAGAATTTTTCCCCTCTGTCATCCATGACGCTTGGCTCAAGAGGATCGAGTGTCGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAACTTGAACGGGGAGAAAAAGGTATTGGAGATGGCACAGTTAGCTATGGAATGGACGATGGTGATGACATATACATGCGCTCTTGGACTGGCACCATCATTGGTCCACATAATACTGTACATGAAGGAAGAATATATCAGTTGAAGCTGTTTTGTGACAAAGATTACCCAGAGAAGCCCCCAAGTGTTCGATTTCATTCACGGATCAATATGACCTGTGTTAATCATGAAACAGGAGTGGTTGAACCAAAGAAGTTTGGCGTCCTTGCAAATTGGCAGCGAGAGTACACCATGGAGGATATACTGACCCAGCTGAAGAAGGAAATGGCTGCTCCACATAACCGGAAGCTTGTCCAGCCTCCAGAAGGTACCTACTTTTAG 528 0.4583 MEFCLLPRRIPYFRQIHHIYAKNFSPLSSMTLGSRGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGVLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1310 175 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 42 175 IPR000608 -
Alju01g1310 175 Gene3D Ubiquitin Conjugating Enzyme 27 175 IPR016135 -
Alju01g1310 175 SMART ubc_7 45 173 - -
Alju01g1310 175 Pfam Ubiquitin-conjugating enzyme 72 165 IPR000608 -
Alju01g1310 175 SUPERFAMILY UBC-like 40 175 IPR016135 -
Alju01g1310 175 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 75 163 - -
Alju01g1310 175 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 33 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1310 Alju-ChrAlju01 10295958 10299919 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1310 01 10295958 10299919 Alju01g1310 01 10295958 10299919 ECH