Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1302 ATGGCTTCTCCACCCATTCTTCATCTACTCTACCTCTTTTCTCTTATCTCCTTCGCTTCATCATCCACATCCATTACCCTCCCTCTCTCCCCCTTACACGCCATACACTCTTCTTCCGATCCCCTTCAGACCCTCAAAGTCGTTGCCTCTGCTTCCCTCACCAGAGCTCACCACCTCAAGCACCCTAAATCCAATTTCACTACTCCCGTCACCAAGACCCCCGATTACCCAAAAAGCTACGGTGGTTACTCCGTCGATCTCAGATTCGGCACGCCTCCTCAAACCTTCCCTTTCGTCTTGGACACCGGCAGTAGCCTCGTCTGGTTCCCCTGCTCCTCTCATTATCTCTGTTCCAGATGTTCCTTCCCCAACATCGATTCCACTAAACTCCCCACGTTTATCCCTAAGAATTCCTCCTCCGCCAAGTTCGTCGGTTGCAGAAATCCAAAATGTGATTGGATTTTCGGCCCCGATCTTCAGTCTCGCTGCCAACAATGCGAATCCACTGCCCAAAACTGCTCCCAGATTTGCCCCACTTATATAATTCAATATGGTTCGGGCTCAACCGCTGGCTTGTTACTCTTAGAAAACCTCAACCTTCCTGGGAAAATCGTGCCCGATTTCCTCGTTGGGTGCTCCATCATGTCGATCCGTCAACCCGCCGGAATAGCCGGGTTTGGTCGAGGGCCTGAATCGCTGCCTTCGCAGTTGGGTCTCAAGAAATTCTCTTACTGTTTGATTTCTCACCGGTTCGACGACTCCACCGAAAGCAGTGACTTCATTTTGCAGAGTGAGTCCTCCGGCGACACTAAAACCGATGGCCTCAGCTACACTCCTTTTCAGAAAAACCCAGCTGCCAACAACACAGCATTCCGCGAGTATTATTACGTGACTATTCGAAAAATCATCATCGGTGGCGAGGTAGTCAAGATTCCGTCCAAGCATTACGAGCTAGATTCAGACGGTAATGGGGGCACCATAGTGGACTCAGGAACCACCTTCACATTCATGGAAAGGCCCATCTACGATATGGTGGCGCAAGAATTCGAGAAACAGATGGCTAATTATACAAGAGCCAAGGACGTAGAAACACGATCCGGTTTGAGCCCCTGTTTCGATTTTTCAGGTCTGGAGACGATTTCTTTCCCGGAATTCACGATCAAATTCAGAGGGGGTGCCAACATGACATTGCCCCTGGAGAACTATTTCTCGTTGGTGGGCGAAGGGCAAATTGCCTGCCTGACGATTGTCTCAGGCAATGGGAGCGTTCCGGCAGCGTCCAAGGGGCCGGCTATGATTTTAGGGAACTATCAGCAGCAGAATTTCTACGTGGAATATGACTTGGAAAATGAGAGATTTGGATTTGGGGCTCGAAATTGCCACAAGGAGACTTAG 1395 0.4996 MASPPILHLLYLFSLISFASSSTSITLPLSPLHAIHSSSDPLQTLKVVASASLTRAHHLKHPKSNFTTPVTKTPDYPKSYGGYSVDLRFGTPPQTFPFVLDTGSSLVWFPCSSHYLCSRCSFPNIDSTKLPTFIPKNSSSAKFVGCRNPKCDWIFGPDLQSRCQQCESTAQNCSQICPTYIIQYGSGSTAGLLLLENLNLPGKIVPDFLVGCSIMSIRQPAGIAGFGRGPESLPSQLGLKKFSYCLISHRFDDSTESSDFILQSESSGDTKTDGLSYTPFQKNPAANNTAFREYYYVTIRKIIIGGEVVKIPSKHYELDSDGNGGTIVDSGTTFTFMERPIYDMVAQEFEKQMANYTRAKDVETRSGLSPCFDFSGLETISFPEFTIKFRGGANMTLPLENYFSLVGEGQIACLTIVSGNGSVPAASKGPAMILGNYQQQNFYVEYDLENERFGFGARNCHKET 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1302 464 ProSiteProfiles Peptidase family A1 domain profile. 83 456 IPR033121 -
Alju01g1302 464 Pfam Xylanase inhibitor N-terminal 83 250 IPR032861 -
Alju01g1302 464 Pfam Xylanase inhibitor C-terminal 295 456 IPR032799 -
Alju01g1302 464 SUPERFAMILY Acid proteases 78 461 IPR021109 -
Alju01g1302 464 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Alju01g1302 464 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
Alju01g1302 464 PRINTS Pepsin (A1) aspartic protease family signature 432 447 IPR001461 GO:0004190|GO:0006508
Alju01g1302 464 FunFam Aspartyl protease family protein 266 463 - -
Alju01g1302 464 CDD pepsin_A_like_plant 82 460 IPR034161 -
Alju01g1302 464 PANTHER OS07G0603500 PROTEIN-RELATED 28 460 - -
Alju01g1302 464 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 98 109 IPR001969 GO:0004190|GO:0006508
Alju01g1302 464 Gene3D Acid Proteases 60 260 IPR021109 -
Alju01g1302 464 Gene3D Acid Proteases 262 464 IPR021109 -
Alju01g1302 464 FunFam Aspartic proteinase nepenthesin-2 56 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1302 Alju-ChrAlju01 10244552 10245946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1302 81 462 Miscellaneous Gene Families AT1G44130 23.153 6.55e-13 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1302 01 10244552 10245946 Alju01g1302 01 10244552 10245946 ECH