Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1241 ATGGTTCTGTGTCTGCCAAAACCAAAGACCATGTTCACTGCAAAACCATCTCCTCTGGTTGCCTTCGTTCTGGTTCTTATTCTCTGCATTACGGGCTTTTATACCGTGAATCACCCTCACTCTTTTTCGCCATCTCTCACTTCCCATAATGCGTCATACTTCCGCGATATTTTCCTCTCCTCTTCCTCTAACTCTACCATCGCCTCCTATCTTCGTGATCTTACTGTCCACCCGCACCTTGCGGGAACAAAACTCGGCTTCGACACCGCCCGGTATGTTCTCAACCATTTCAGAGACCTGGGCCTTCAGACCCACGCTGTGAACTACAAAGCCCTCCTCTCTTATCCCCTGCACTCCTCCATGTCCGCGCATTTTAGTGACGGGTCCTGTTCGGAGTTTCCCTTAGGTGAAATGGTTCGGTCCAATCAGGTTGACCAGGAGGTGGTATCACCTTACCATGCTTACTCGCCATCTGGTTCGGCGTATGCGAAGGCGGTTTTCGTTAATTATGGAAGGGACGAGGACTACCTTGCGCTAGAGAAGCTAGGAGTGAACGTTAGCGGATGCATAGCGATAGCGCGGAAAGGTGGCGGTTTGCCCAGAGGCGCGGTGGTGGAGAAGGCGGAGGCGTACGGTGCGGTGGCGGTGCTAATATATGCCGATGGGGACGGGTTTGGTAAAGGGTTTGAGAGAGGAAACGTCATGAGAGGCATAGGGGACCCACTAACCCCTGGGTGGGCTGGGGTTGATGGCGGCGAGAGCTTGGATTTGGAAGATAGTGAGGTTTTGAAAAGGTTTCCCAAAATTCCATCCATGCCCCTTTCCGCTGAGATCGCTGAGACTATTTTGCACTCGCTAGTAGGCACCGAGGTGCCACAGGAATGGAAGAGTTCTCTAGGGTCCAATGTTAGACTCACGCATGTTGGTCCTGGCCCGACAATGCTCAATTTCACGTACCAGGGGGAAAAGAAGGTGGGTACCATTGAAAATGTTTTTGCAGTCATAAAGGGATCAGAAGAACCTGATCGTTTTGTGCTGCTTGGGAACCATCGTGATGCTTGGACATATGGTGCTGTAGATCCCAGCAGTGGGACTGCAGCCCTACTTGACATTGCTCGGCGGTTTTCTCTTCTATTACACATTGGGTGGAGTCCTCGCAGGACGGTTATCCTTTGCAGTTGGGATGCAGAGGAATTTGGAATGATTGGATCCACCGAGTGGGTAGAGCAAAACCTTGTCAATCTGGGCTCCAAAGCAGTTGCATACCTCAATGTTGACTGTGCTGTCCAAGGTTCTGGTTTCTTTGCTAGCGCTACTCCTCAGCTAGATGATCTCATCCTTGAGGTCACTGAAAAGGTCAGGGATCCTGACGCCAAGGGTGCCACACTCAATGAAAATTGGGCAGCAGATGATGGAAATTCTAATATTTTGAGGCTCAGTGGACTTGACTCCGATTTTGCACCATTTGTGCAACATGCCGGTGTTCCCTCTATTGATTTGTATTATGGAAAAGATTTTCCTCTCTACCACACTGCTTTTGACTCCTACAGCTGGATGACACAATATGGAGATCCGTTATTTCAGCGACATGTGGCTGTTGCTGGAGTTTGGGGACTTCTAGCACTTCACCTGGCTGATGATCCTATTCTTCCCTTTAATTACCATTCTTATGTAGATCAGTTACAGACGTACAGGAACAGACTGAGCAACATTTTAGACCAATCAATCTCTCTGCAACCATTAACTACCTCAATACAAGACTTTGCATCAGCCGTCAAAGAATTTGATGAAGAATTAAATGCACTGAGATTGCAAGAAGCCGCTGATTGTTTCGTGCATTCAAAAAAGCGAGCATTAAATGATAGACTAATGCTTGCTGAAAAAGGGTTCCTGGATCCAGATGGACTCAGAGAAAGGAACTGGTTCAAGCATCTGGTGTTTGGACCCCCGAGCGAGCATGAAAGTAAGATGGATTTCTTCCCAGGAATTGCTGATTCCATTGCTTGGTCAGCCAGAAGTAGTGAAAAAGAAGGGCAGGCGGCAATTCGACATGAGATCTGGAAGGTTGCCAGAGCCATCAAAAGAGCTGCTTCAGCACTGGGGGGAGAGCTCATGTAA 2118 0.4868 MVLCLPKPKTMFTAKPSPLVAFVLVLILCITGFYTVNHPHSFSPSLTSHNASYFRDIFLSSSSNSTIASYLRDLTVHPHLAGTKLGFDTARYVLNHFRDLGLQTHAVNYKALLSYPLHSSMSAHFSDGSCSEFPLGEMVRSNQVDQEVVSPYHAYSPSGSAYAKAVFVNYGRDEDYLALEKLGVNVSGCIAIARKGGGLPRGAVVEKAEAYGAVAVLIYADGDGFGKGFERGNVMRGIGDPLTPGWAGVDGGESLDLEDSEVLKRFPKIPSMPLSAEIAETILHSLVGTEVPQEWKSSLGSNVRLTHVGPGPTMLNFTYQGEKKVGTIENVFAVIKGSEEPDRFVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSLLLHIGWSPRRTVILCSWDAEEFGMIGSTEWVEQNLVNLGSKAVAYLNVDCAVQGSGFFASATPQLDDLILEVTEKVRDPDAKGATLNENWAADDGNSNILRLSGLDSDFAPFVQHAGVPSIDLYYGKDFPLYHTAFDSYSWMTQYGDPLFQRHVAVAGVWGLLALHLADDPILPFNYHSYVDQLQTYRNRLSNILDQSISLQPLTTSIQDFASAVKEFDEELNALRLQEAADCFVHSKKRALNDRLMLAEKGFLDPDGLRERNWFKHLVFGPPSEHESKMDFFPGIADSIAWSARSSEKEGQAAIRHEIWKVARAIKRAASALGGELM 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1241 705 CDD M28_PSMA_like 327 552 - -
Alju01g1241 705 SUPERFAMILY Transferrin receptor-like dimerisation domain 551 702 IPR036757 -
Alju01g1241 705 SUPERFAMILY PA domain 112 332 IPR046450 -
Alju01g1241 705 Coils Coil 585 605 - -
Alju01g1241 705 Gene3D Zn peptidases 65 551 - -
Alju01g1241 705 Pfam Transferrin receptor-like dimerisation domain 576 700 IPR007365 -
Alju01g1241 705 Pfam PA domain 163 227 IPR003137 -
Alju01g1241 705 Gene3D - 119 321 - -
Alju01g1241 705 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 19 702 IPR039373 -
Alju01g1241 705 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 552 703 - -
Alju01g1241 705 Pfam Peptidase family M28 330 517 IPR007484 -
Alju01g1241 705 SUPERFAMILY Zn-dependent exopeptidases 63 550 - -
Alju01g1241 705 Gene3D - 553 705 IPR036757 -
Alju01g1241 705 FunFam Os01g0740650 protein 321 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1241 Alju-ChrAlju01 9670914 9676507 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1241 01 9670914 9676507 Alju01g1241 01 9670914 9676507 ECH