Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1240 ATGGAGAATCAGCAGGGGAATAAAGGTGATGCTGATACTTTCGACAAATACACATGGAAGATTGAGAACTTCTCCAAACAAAACGCCACCAATCTGCGCTCCAAGCCCTTCAAAATCTACGGTTTTAAATGGAAGATGCATGTGCAGCCGTTGAGGAGGGACGTGGACCATTTTTCAGTGTATTTGACGGTGGCGGATTCATTGCCGCCGTATGGATGGAGCAGAAACACCTATTTCAAGATGGTCCTCATTAATCAGATCGACCCCAACAAGTCTATTATCAAAGAAACACAGCAGAAATTCAACGGAGGACATCGTAGCTGGGGCTCATTCTTCGTGAATCTCAAAGACTTCTACGACCCCAAACAAGGATACCTCCTCAAGAACACTTGCATCATCGAAGCCCACGTTTGTATCCCCGACTTTGTCCCCAAAATTCAACCCTCCACCGATAATATCCTCCCAACAATCCCAGAATCTAACCATCAAGTTGAACAACAACAACAACAAAGTACAAAACCCACCCCACACAACGAAGATCATCAAACAACACCAGAATATTTCGACCAAATTACCGACACACCTACTTCATCCCTAACCAGCATGTCATCAAGTCATAATAATGCAGAACTTGACGAAGTCCATTGCTCAGATTTAACCCTAAGAGACCTCATAGATGTGACCAGTTTTGAAGCAGACGAAGCAGCTTTTGTCCCTCTATTGGAAGAAACATGCACGTGGCATCCTCAATTGATATCATCTCAAAGGGACAGAACTCGCTGGTTCAAACTATGGGCATTTACGTCTTTAGGCCAAGTTCTGTACTTTCTCAAGACCAAAAGAGTTAAGGACATGGACGAAGATGGGTGTAAGTACCTTGAAGGTTTATGGGACGAGCTTGTGAAGTCGTCTGGGTTTGACTTGAGTTGGTTAGGGCCTTATGTTCAATCGGCATTGAGTGCCAAGAATATTGTGACAAAAGCCGATAATGTGGAGAAAGCTACGCAGAAAATTATTGATTTGGAGATTAAAGTGAAGAAGCTGAAGGGAGATTTGGCTGTTGCAGAAATGGAGCATGAATTGGCAAGAAGAGAGTTGGTCGAAATCAAACAAAGTTTCCACGAGCTGGATTTGAACGCTGCATTAGATTATGCCATGATGGAGAACCAGCAAGAAGCGGGTATCGTTTTCAAGAAATTCACGTGGATAATTCAAGATTTCTCAAAAAACAAAACCAAGAAACAACGCTCCAAGTCTTTTGAAGCTGGTGGTTGTAAATGGCGAATCCTTGTGAATCCAATTGGAAAGGGTGTAGAGTATTTGTCCTTGTTTCTGAAGGTTGCAAATTCTCTACCATCATTTGGTTGGACCAGATATGTTTATTTCAAGCTGTCTCTCATCAATCAGATCGACAACGAGAAGTCCATTACAAAAGAGACTCAGCAAAAGTTCAATGCAGGACATAGTAGCTGGGGGGCATCAATATTGCTTCTCAATGACTTTTATAATACCACAAAAGGTTATCTAGTGAACGACTCATGCATTATAGGAGCTCAAGTATCAGTCTCAGACGTTGCTTTTAAGGTTCAAGACAACCCCACCAACATCACTAACCAAACACAAGAGGAACAAGCAAAAACAGAGGAATTAACAGAACAGCTGGAAGATCATCGAAGCATTTATTCCTCGGATGGGACACCTAGTTTCAAATCCTCTGATGATTACACATGGAATCAGACAAGTCAAGCAGAATCAGAAAAACAAGATATTCTAGGGGCACAAGATGAGACACCAAGTCCTAAACCATCACTTTATGAACCAACTGCACCACCTTTATATCCGTGTGTAGATGAATCACCCGTGGAAATACCCTTAACCCCTCTGAGTGATCTTATAGATTATAAGAGTTTAAAGCCAGAAGAAGTGGGTTTTAAACTCCCAAGGTTCTGCTTGGTTGATGAAGCTCTGATCTGGGAGATCGAATTGTTGAACTTGGTGGGCTGCACAAAACTACAAATGGATAATCAAAAAACAAGTCATTTACCCAATGAGAAATTCACATGGAGAATTGAAAACTTCTCTAAGTTGACGTCCAGGAAGCTGTACTCCGAGACTTTCACTCTGGGCGGTTATCTATGGAGGATTCTTATGTTTCCTAAAGGGAACAATGTGGACTACTTGTCTTTATATTTGGATGCTGCGGATTCCCAGAGTTTACCTTATGGTTGGTCCAGATGTGCATGTTTCAGCTTGGCTGTAAGTAATCAAGTGGTCTCGAATTATACGGTTAAGAAAGAGACTCAACATTGGTTTAAAGCACGTGAGAGTGACTGGGGCTTCACATCATTTATGCCTCTAGGTGAACTTTATGACCCTACGAGAGGTTACCTTAAAGGAGATACATGTATAATTAATGTTGAGGTTTCTATTCTCATGTCTGAAAAGGAGAATGAAGTAGATAAAGCATCTGACCCAACATCCTTGAAATCTGGAGATCAAGCTGGACAAATGGAAGTGGAAATTCCACAGCAAGATCAAAAGCAAGGAGTGAAAACTTCACGTTCTGCATGTGTTTCCATGGAGCCTGCTGAGCATACTGGTACTCCTTCACTGCCTGCAGGACTGAGTTCAAACCCAATGGATGAGCTTTCGGATTTCAGGGGTCTCGGGAAAATAGAAAGTGCTTTTGTCCCACTCCTGGAGGAAGTATGTTCCAAGCACCCATCACTCCTTGAATGTCAGCAGAAGAGAAGTGGACGATTTGTCGAATGGGCATTCACAGCTCTGGGCAGAGTTCTGCACTTCCTGAAGACTAAAAGGGGGAAAGACATGAATGATGAGACTTGTGAACATCTTCAAATTTTGTGGGAGGAACTTGAGACATTTAGATTTGATTTGACTTGGCTGGAGCCTCATGTTCAATCAGCCTTAGGCATGAAAAATTACGTGGAGAAGGCAATGCAGGTGAAGAAGTTGAGGGATAATGTGAGTGCTCTGGAGATGGAAATGAAGAGGCTTAAGGCAAAGCTTGCTGCTGCAGAGATAGATCATGAAATAGCAAAAAGAGACTTGGTGCTAGCAGAGGAAGGGTTCGAAGAGAGGGATTTAGATGCTGAACTTGGATATGGGAGAGACCATAGACTGTAA 3147 0.4245 MENQQGNKGDADTFDKYTWKIENFSKQNATNLRSKPFKIYGFKWKMHVQPLRRDVDHFSVYLTVADSLPPYGWSRNTYFKMVLINQIDPNKSIIKETQQKFNGGHRSWGSFFVNLKDFYDPKQGYLLKNTCIIEAHVCIPDFVPKIQPSTDNILPTIPESNHQVEQQQQQSTKPTPHNEDHQTTPEYFDQITDTPTSSLTSMSSSHNNAELDEVHCSDLTLRDLIDVTSFEADEAAFVPLLEETCTWHPQLISSQRDRTRWFKLWAFTSLGQVLYFLKTKRVKDMDEDGCKYLEGLWDELVKSSGFDLSWLGPYVQSALSAKNIVTKADNVEKATQKIIDLEIKVKKLKGDLAVAEMEHELARRELVEIKQSFHELDLNAALDYAMMENQQEAGIVFKKFTWIIQDFSKNKTKKQRSKSFEAGGCKWRILVNPIGKGVEYLSLFLKVANSLPSFGWTRYVYFKLSLINQIDNEKSITKETQQKFNAGHSSWGASILLLNDFYNTTKGYLVNDSCIIGAQVSVSDVAFKVQDNPTNITNQTQEEQAKTEELTEQLEDHRSIYSSDGTPSFKSSDDYTWNQTSQAESEKQDILGAQDETPSPKPSLYEPTAPPLYPCVDESPVEIPLTPLSDLIDYKSLKPEEVGFKLPRFCLVDEALIWEIELLNLVGCTKLQMDNQKTSHLPNEKFTWRIENFSKLTSRKLYSETFTLGGYLWRILMFPKGNNVDYLSLYLDAADSQSLPYGWSRCACFSLAVSNQVVSNYTVKKETQHWFKARESDWGFTSFMPLGELYDPTRGYLKGDTCIINVEVSILMSEKENEVDKASDPTSLKSGDQAGQMEVEIPQQDQKQGVKTSRSACVSMEPAEHTGTPSLPAGLSSNPMDELSDFRGLGKIESAFVPLLEEVCSKHPSLLECQQKRSGRFVEWAFTALGRVLHFLKTKRGKDMNDETCEHLQILWEELETFRFDLTWLEPHVQSALGMKNYVEKAMQVKKLRDNVSALEMEMKRLKAKLAAAEIDHEIAKRDLVLAEEGFEERDLDAELGYGRDHRL 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1240 1048 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 683 1014 - -
Alju01g1240 1048 SMART math_3 399 501 IPR002083 GO:0005515
Alju01g1240 1048 SMART math_3 16 118 IPR002083 GO:0005515
Alju01g1240 1048 SMART math_3 685 789 IPR002083 GO:0005515
Alju01g1240 1048 CDD MATH 399 520 IPR002083 GO:0005515
Alju01g1240 1048 SUPERFAMILY TRAF domain-like 682 811 - -
Alju01g1240 1048 FunFam Ubiquitin carboxyl-terminal hydrolase 13 681 817 - -
Alju01g1240 1048 ProSiteProfiles MATH/TRAF domain profile. 14 137 IPR002083 GO:0005515
Alju01g1240 1048 Pfam MATH domain 404 522 IPR002083 GO:0005515
Alju01g1240 1048 Pfam MATH domain 690 810 IPR002083 GO:0005515
Alju01g1240 1048 Pfam MATH domain 21 139 IPR002083 GO:0005515
Alju01g1240 1048 MobiDBLite consensus disorder prediction 150 184 - -
Alju01g1240 1048 ProSiteProfiles MATH/TRAF domain profile. 397 520 IPR002083 GO:0005515
Alju01g1240 1048 MobiDBLite consensus disorder prediction 839 855 - -
Alju01g1240 1048 SUPERFAMILY TRAF domain-like 16 141 - -
Alju01g1240 1048 Coils Coil 982 1023 - -
Alju01g1240 1048 ProSiteProfiles MATH/TRAF domain profile. 683 808 IPR002083 GO:0005515
Alju01g1240 1048 CDD MATH 16 137 IPR002083 GO:0005515
Alju01g1240 1048 MobiDBLite consensus disorder prediction 560 588 - -
Alju01g1240 1048 SUPERFAMILY TRAF domain-like 399 525 - -
Alju01g1240 1048 CDD MATH 685 808 IPR002083 GO:0005515
Alju01g1240 1048 MobiDBLite consensus disorder prediction 534 610 - -
Alju01g1240 1048 MobiDBLite consensus disorder prediction 150 178 - -
Alju01g1240 1048 MobiDBLite consensus disorder prediction 545 559 - -
Alju01g1240 1048 Coils Coil 331 372 - -
Alju01g1240 1048 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 681 825 IPR008974 GO:0005515
Alju01g1240 1048 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 397 541 IPR008974 GO:0005515
Alju01g1240 1048 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 12 144 IPR008974 GO:0005515
Alju01g1240 1048 MobiDBLite consensus disorder prediction 839 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1240 Alju-ChrAlju01 9660584 9669591 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1240 01 9660584 9669591 Alju01g1240 01 9660584 9669591 ECH