Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1170 ATGACCGACGCAATTGAGCCTTCTACATCATCTTCACTGTCGTCGTCGTCGGCGGGGGACCCAAGCACCGTTATTCATCCGAGGCGCGAACCCTTCGAGCATGGCCTCTTACCCATCCCCAAGCTAATCTTCTCCGACCCGACGCAAACCCTAATCTCCCTGAAGCAGAAGCTTCTTGAGCCATCCCCTAATCAACGGGCCAACTCTACGGCCATCTCCGACGCTCTACAGATCTCCATTGACTGCGCCAGGCTCGTTCTCGATACCCTCGCCTCCGTATTACACTCGGAGTCCGAACCTTTAGTTAGAGCCAACCCGGAAGAAATCGAATCCATTGGTGCCGATATCCATGACCTGCTTTTGTTCTTGTACATTCAATCCTACAAGAAGCTGCTTCCCAGAACGCACAAGGACTCTGCGGCCGTGGCCGATGTTTGGCCTTCCACCTCGGCTTTTGATGGATACTTGTCTGCTCTCTCGCCGTTGCAGCTAGTGCGTAGCAACAGTCGTCGATTTATGCCATCACAAGCTGATGAGGAGGCGCATCAGTTGTCATATTTGCAAAAGCACCTGGCCAACATTCTGTCTCTTTTAGCTGAGCCTATGGAGGGGGAAGGGGAAGAATCTCTGGTTTTAACTATGGATAGATTTGAGCACCTTGGGTTTCTAATTCAGTTCGGAGATAAGGGGTCTGAAGGAAACACTTTGAGCCAATCGTCTCCCTTTTTTGCAAACTCAGATCCTGACATGCCAGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAAAATATTGCGTCTTCTTTAGAAAATATTTCTGAAAGGGCTTCGCTAAGGGAAAATGGACCTGCCAGCGTATCTGATCAGGATGTTGCGATGGTTGATGCATGTACTGTCCCAGTTAAGGCCTCACCAAGTACTAGAGGTCCATGTTTCATTGAAGGGATCTCTAAATCATCATACTCGAAGAATGCATCTGACATTAAAGGTTCATCTGTTAAGGTTCTAAATTGCCATGAGTCTGCTATTTACATTTTAGCACCTGTGAGATTTGCCACTGTCTATGGTTGCTCGGATGCTACTATTGTTCTTGGAGCAGTTGGCAAGGCTGTAAGAGTAGAACACTGTGAACGAGTTCATGTGATTGTAGCAGCTAAACGCATATGTATTGCCAATTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCCACCTCTTATTGTTGGTGATAACCATAAGCTGCAGGTGGCACCCTACAATACATTCTACTCCCAGCTAGAGGAGCACATGACTGAAGCTGGAATTCTGCCCACTGCAAACAGGTGGGATGAACATGTGGCCTTGGGTGCAGTTGATCTTCATGATTCATTATCTCATCCGGCTGGTGTCTCTGATGTTCAAGCTGAGTCAGCTGCTCGGGTGGATCCTGATCAGTTCACCGATTTTGTGATTCCAGACTGGCTTGGAGGAGAGTCAACTGGCTCTACAAAACACAACCCATTCACCTTACCAGATGCTTATATGGCTTCGCAGATTAGAAATCAAAAGAATTTAGGGGAGATAAGGCAACTCTTGCGGGAAGCACCCCTTGAAGAAAATCGTAAAAAAGAATTGTCATCCGCGCTTCATGTTTGCTTCAAGGACTGGTTATATGCATCCGGAAACATTCGGCAACTCTACTGTCTACAAGGCGAATGA 1710 0.4743 MTDAIEPSTSSSLSSSSAGDPSTVIHPRREPFEHGLLPIPKLIFSDPTQTLISLKQKLLEPSPNQRANSTAISDALQISIDCARLVLDTLASVLHSESEPLVRANPEEIESIGADIHDLLLFLYIQSYKKLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANILSLLAEPMEGEGEESLVLTMDRFEHLGFLIQFGDKGSEGNTLSQSSPFFANSDPDMPAVPVPAAQVHDWLLQNIASSLENISERASLRENGPASVSDQDVAMVDACTVPVKASPSTRGPCFIEGISKSSYSKNASDIKGSSVKVLNCHESAIYILAPVRFATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQPPLIVGDNHKLQVAPYNTFYSQLEEHMTEAGILPTANRWDEHVALGAVDLHDSLSHPAGVSDVQAESAARVDPDQFTDFVIPDWLGGESTGSTKHNPFTLPDAYMASQIRNQKNLGEIRQLLREAPLEENRKKELSSALHVCFKDWLYASGNIRQLYCLQGE 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1170 569 PANTHER UNCHARACTERIZED 21 567 IPR039589 -
Alju01g1170 569 MobiDBLite consensus disorder prediction 1 22 - -
Alju01g1170 569 MobiDBLite consensus disorder prediction 1 27 - -
Alju01g1170 569 ProSiteProfiles C-CAP/cofactor C-like domain profile. 303 439 IPR017901 -
Alju01g1170 569 SMART carp 379 413 IPR006599 -
Alju01g1170 569 SMART carp 341 378 IPR006599 -
Alju01g1170 569 Gene3D - 314 457 IPR016098 -
Alju01g1170 569 Pfam Tubulin binding cofactor C 333 448 IPR012945 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1170 Alju-ChrAlju01 9087645 9095691 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1170 01 9087645 9095691 Alju01g1170 01 9087645 9095691 ECH