Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1066 ATGGATATAAGTAATGAGGCTAATGTCAGCCCCTTTTCAATTGGGCCTTCAAGTTTTGTTGGGAAAACAATTGCTTTTAGGATTCTTTTCTGCAAGTCTATCTCACATTTGAGGCATCAGATATTTCGTCTACTGTTGGGTCTCTTCTGTAGTTTCAGGGGATGTATAAAACCCATTATATCATGGTTGCATCCAAGAAATCCTCAAGGGATATTAGCAATGATGACAATAGTTGCTTTCTCTTTGAATCGATACACAAATGTGAAAGCAAGGGCTGAAATGGCATATAGGAGGAAATTTTGGAGAAACATGATGAGATCTGCATTGACCTATGAGGAGTGGGCTCATGCGGCTAAGATGCTTGATAGAGAAACACCAAAAATGAATGAATCAGACCTTTATGATGTAGAATTGGTGAGAAACAAGCTTCAAGAGCTCCGCCATCGACGTCAACAGGGGTCTCTTAGAGACATAATATTTTGTATGCGTGCTGATCTTGTTAGAAATCTAGGCAATATGTGTAATTCTGAGCTTCATAAAGGTAGGCTTCAGGTGCCCAAATTAATCAAGGAGTATATTGATGAAGTATCCACACAGTTGAGGATGGTATGTGATTCTGATTCAGAGGAGCTTTCATTGGAAGAGAAGCTAGCTTTCATGCATGAAACCAGACATGCATTTGGGAGGACTGCTTTGCTATTAAGTGGGGGTGCTTCTCTTGGCGCTTTTCATGCGGGTGTAGTGAAAACACTGGTGGAACACAAACTCTTGCCCAGAATAATTGCTGGTTCAAGTGTAGGTTCCATTATGTGTTCTATTGTTGCTACTCGTTCTTGGCCAGAGCTTCAAAGCTTTTTTAAGGATTCATTGCACTCATTGCAGTTTTTTGATCAAATGGGTGGAATTTTTGCTGTTGTTAAGAGGGTTACAACATTTGGCGCTGTCCACGAGATCAGACAGTTGCAAATGATGTTGAGGCATCTGACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGTCGAATTCTTGGGATAACTGTTTGCTCGTCAAGAAAACATGAACCTCCCAGGTGTCTCAACTATTTAACTTCGCCTCACGTTGTTATATGGAGTGCAGTCACAGCTTCTTGTGCCTTTCCTGGCCTTTTTGAGGCTCAGGAATTGATGGCTAAGGACAGAAGTGGAGAAATTGTTCCTTACCACCCTCCATTTAATTTGGGCCCAGAGGAGGGATCCTCACCAGCACGTCGTTGGAGAGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGTTGAAAGAGCTGTTCAATGTCAATCATTTTATTGTCAGTCAAGCCAACCCTCATATTGCTCCATTGTTGAGATTGAAAGAATTTGTAAGGGCTTATGGAGGCAATTTTGCTGCCAAGCTTGCTCATCTTACAGAGATGGAGGTGAAACATAGATGTAATCAAATACTGGAACTTGGTTTTCCATTAGGTCGATTTGCCAAGTTGTTTGCTCAAGACTGGGAAGGTGACGTAACTGTTGTTATGCCTGCTACTGTGTCTCAGTACTTGAAAATTATCCAGAACCCTTCCCACCTCGAGCTTCAAAAGGCGGCCAACCAGGGGAGAAGGTGCACTTGGGAGAAGCTTTCAGCCATAAAAGCGAACTGTGCAATTGAGATTGCTCTTGATGAATGTGTTGCCATGCTCAACCACATGAGAAGACTCAAAAGAACATCCGAGAGAGCATCTGCTTCTTCTTCTCATGGTCTGGCCAATAGTGTCAGATTCAGCGCTTCAAGAAGAATCCCTTCATGGAATTGTATGGCGCGAGAGAATTCTACGGGTTCCCTCGAAGACTTTCCAACAGATTCCTCACTGCATCAAGGTGCCGCTACTAAGAACTGGAAGACCCACCGTACCATACATGATCATGGAAGTGACAGCGAATCTGAAAATGTTGATCAGAGCTCTTGGACACGTTCTGGTGGGCCTTTGATGAGAACTGCTTCAGCAAATAAGTTCGTAGACTTTGTCCAGAGCTTAGATTTTGACACTGAGCTAAATAGAGGCATGGCAGCTCATTCGAATCGTCAAGCAGCTCAGTCCAACCACATTTCTAGGGCCTCGACACCTGACAGCATAATGGTGAATGAAGGTGATTTTTTGCAGCCTGAGAGGATACAAAATGGGATTGTGTTTAATGTTGTGAAGAAAGAAGACTTTGCACAACCTAGGACCCATGATCTTGAGCAGCTCGATCCCGAGGTTGCTGAATGTGTTGTCCAAAGTGACTGTCCAGGCAAGGAGATGGATGCTGCTAGCTCTGCTTCTGATAGTGGAGACAGTGATTCTACAACAGCCGATTCCTTAAGAACGGATCATTCTACCACTGATGTGGGCAAGGATCAGCGCACTTAA 2415 0.4335 MDISNEANVSPFSIGPSSFVGKTIAFRILFCKSISHLRHQIFRLLLGLFCSFRGCIKPIISWLHPRNPQGILAMMTIVAFSLNRYTNVKARAEMAYRRKFWRNMMRSALTYEEWAHAAKMLDRETPKMNESDLYDVELVRNKLQELRHRRQQGSLRDIIFCMRADLVRNLGNMCNSELHKGRLQVPKLIKEYIDEVSTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGAFHAGVVKTLVEHKLLPRIIAGSSVGSIMCSIVATRSWPELQSFFKDSLHSLQFFDQMGGIFAVVKRVTTFGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSSRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSSPARRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRAYGGNFAAKLAHLTEMEVKHRCNQILELGFPLGRFAKLFAQDWEGDVTVVMPATVSQYLKIIQNPSHLELQKAANQGRRCTWEKLSAIKANCAIEIALDECVAMLNHMRRLKRTSERASASSSHGLANSVRFSASRRIPSWNCMARENSTGSLEDFPTDSSLHQGAATKNWKTHRTIHDHGSDSESENVDQSSWTRSGGPLMRTASANKFVDFVQSLDFDTELNRGMAAHSNRQAAQSNHISRASTPDSIMVNEGDFLQPERIQNGIVFNVVKKEDFAQPRTHDLEQLDPEVAECVVQSDCPGKEMDAASSASDSGDSDSTTADSLRTDHSTTDVGKDQRT 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1066 804 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 232 435 IPR002641 GO:0006629
Alju01g1066 804 MobiDBLite consensus disorder prediction 774 792 - -
Alju01g1066 804 SUPERFAMILY FabD/lysophospholipase-like 228 574 IPR016035 -
Alju01g1066 804 Gene3D Cytosolic phospholipase A2 catalytic domain 310 523 - -
Alju01g1066 804 CDD Pat_SDP1-like 162 569 - -
Alju01g1066 804 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 57 570 - -
Alju01g1066 804 Gene3D Cytosolic phospholipase A2 catalytic domain 228 309 - -
Alju01g1066 804 MobiDBLite consensus disorder prediction 759 804 - -
Alju01g1066 804 Pfam Patatin-like phospholipase 232 423 IPR002641 GO:0006629
Alju01g1066 804 Pfam Domain of unknown function (DUF3336) 94 225 IPR021771 GO:0004806|GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1066 Alju-ChrAlju01 8063372 8067212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1066 1 773 Acyl Lipid Metabolism Gene Families AT5G04040 74.500 0.0 1232
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1066 01 8063372 8067212 Alju03g2205 03 49151594 49154920 CCT
Alju01g1066 01 8063372 8067212 Alju01g1066 01 8063372 8067212 ECH