Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1065 ATGGCCTTGATGGTACCTCTTCCCTCCCACCATTTAACCCCTCCACCTTCCTCCCTCTTTCCCCTCAGCCCCCTTCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTCTTCTTCAATTCCACACAATGAAGCTTATCAGTCTCAACTCCAAATCTTTCCGCCTCAATCCCAAACAACTCTTTCGCTCCAAAAGGGAACGCTCCGCCGCCTCCAGATCCGATCCATCATCCTTCAGCTCTGGAACGTCGTCGTCTTCTTCCGACGATTCCACTCACAAGCGTGCGCCTGGCGCCACCGGCTCCACGACCCCCACTAGCGTCTTGCCGGACATTTACCCCGACTGGTCTGATCTGTCGACTGAGATTCAGTCCGATCTGGCTCAGGCTTTGAGGCTCATAGACCGAGATGACGACGGCATCATCTCGCGAGAAGAGCTTGAGGTCTTCCTGACCCGGCTCGGAGAGAGCCAGGACGACGTGGCAATGATGCTTAGTGACGTGGATCCAGAAGGACGGGGGTGCATCAGCGTCGAAACGCTCATGAACCGGGTCGGGTCGGGGTGCGGTCCGGAGCCGGACTCTAACGACTTGAAGGAGGCGTTCGAGGTGTTCGATGCGGATCGCGACGGGAAAATCTCGGCGGAGGAGCTGTTAGGGTTTTTCAAGGCTATTGGGGACGAGCGGTGCACGTTAGAGGAATGCCGGCGCATGATAAAAGGGGTTGATAAGAACGGGGATGGATTTGTGTGCTTCGAGGAATTTTCTCGAATGATGGAGCTGCAGCGATGA 792 0.5568 MALMVPLPSHHLTPPPSSLFPLSPLPLLSLSLSLSLILLQFHTMKLISLNSKSFRLNPKQLFRSKRERSAASRSDPSSFSSGTSSSSSDDSTHKRAPGATGSTTPTSVLPDIYPDWSDLSTEIQSDLAQALRLIDRDDDGIISREELEVFLTRLGESQDDVAMMLSDVDPEGRGCISVETLMNRVGSGCGPEPDSNDLKEAFEVFDADRDGKISAEELLGFFKAIGDERCTLEECRRMIKGVDKNGDGFVCFEEFSRMMELQR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1065 263 Gene3D - 60 187 - -
Alju01g1065 263 CDD EFh 197 259 IPR002048 GO:0005509
Alju01g1065 263 ProSitePatterns EF-hand calcium-binding domain. 243 255 IPR018247 -
Alju01g1065 263 MobiDBLite consensus disorder prediction 73 109 - -
Alju01g1065 263 FunFam calmodulin-like protein 3 192 263 - -
Alju01g1065 263 ProSitePatterns EF-hand calcium-binding domain. 206 218 IPR018247 -
Alju01g1065 263 Pfam EF-hand domain pair 196 259 IPR002048 GO:0005509
Alju01g1065 263 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 197 260 - -
Alju01g1065 263 Pfam EF hand 129 150 IPR002048 GO:0005509
Alju01g1065 263 ProSiteProfiles EF-hand calcium-binding domain profile. 193 228 IPR002048 GO:0005509
Alju01g1065 263 Gene3D - 189 263 - -
Alju01g1065 263 ProSitePatterns EF-hand calcium-binding domain. 135 147 IPR018247 -
Alju01g1065 263 SMART efh_1 197 225 IPR002048 GO:0005509
Alju01g1065 263 SMART efh_1 126 154 IPR002048 GO:0005509
Alju01g1065 263 SMART efh_1 160 188 IPR002048 GO:0005509
Alju01g1065 263 SMART efh_1 234 262 IPR002048 GO:0005509
Alju01g1065 263 ProSiteProfiles EF-hand calcium-binding domain profile. 122 157 IPR002048 GO:0005509
Alju01g1065 263 ProSiteProfiles EF-hand calcium-binding domain profile. 230 263 IPR002048 GO:0005509
Alju01g1065 263 SUPERFAMILY EF-hand 113 260 IPR011992 -
Alju01g1065 263 MobiDBLite consensus disorder prediction 65 109 - -
Alju01g1065 263 CDD EFh 126 179 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1065 Alju-ChrAlju01 8049678 8050469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1065 55 263 EF-hand Containing Proteins AT3G10190 49.057 7.31e-56 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1065 01 8049678 8050469 Alju01g1065 01 8049678 8050469 ECH