Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1048 ATGGCTCTAATGGCTACTAGAACGAAACTCGCAAGAGTTCTCACTGCTCTCTCTACTCGAACGCCAAATTCGAGATCAGGGTCTGGCTGCTTCAATCCATTTGGCGCGCTCCAAAAGTTCTCTGCATCTTACACTTCCGCCGCTCTGGCTACCGAGAAATCAGAGACGATGGGTTCGCGATGCATGGGCTTGGAGACACTGGGAGTGAAGGATTATGAGGATTATAGGAAGTCCCGGTACGGTGACATCACTCACAAGGCTGTGCTTGTTGATGCTGTTGGTACTCTTGTTGTGCCCTCTCAACCCATGGCTGAGATATATAGAAAGATTGGGGAGAAGTATGGGGTAGAATACTCGGAGGATGAGATTTTACACCGATACAGAAGAGCTTATGGACAGCCTTGGGGCAGATCTCGGCTCAGATATGTTAACGATGGCAGGCCGTTCTGGCAATACATAGTTAGTTATTCCACTGGCTGTTCAGATTCTCAGTACTTTGAAGAACTTTATAACTACTACATGACAGATAAGGCATGGCACCTCTGTGATCCTGAGGCCGAAAAAGTGTTCCAAGCAATTAGAAAAGCTGGTGTAAAGCTGGCTGTTGTGTCAAATTTCGACACTAGATTAAGACCTCTGCTGAAGGCATTGAACTGTGATAACTGGTTTGATGCAGTGGCAGTATCAGCTGAGGTTGAGGCAGAGAAGCCAAATCCAACCATATTTCTTAAAGCATGCGAGTTATTGGGTGTGAAGCCTGAGGATGCTGTTCATATTGGGGATGATCGTAGAAATGACATATGGGGTGCTAGAGATGCAGGCTGTGATGCTTGGCTTTGGGGAAGTGATGTTCTTTCCTTTAGGGAGGTAGCTCAGAGAATTGGGGTCCAAGTTTGA 897 0.4671 MALMATRTKLARVLTALSTRTPNSRSGSGCFNPFGALQKFSASYTSAALATEKSETMGSRCMGLETLGVKDYEDYRKSRYGDITHKAVLVDAVGTLVVPSQPMAEIYRKIGEKYGVEYSEDEILHRYRRAYGQPWGRSRLRYVNDGRPFWQYIVSYSTGCSDSQYFEELYNYYMTDKAWHLCDPEAEKVFQAIRKAGVKLAVVSNFDTRLRPLLKALNCDNWFDAVAVSAEVEAEKPNPTIFLKACELLGVKPEDAVHIGDDRRNDIWGARDAGCDAWLWGSDVLSFREVAQRIGVQV 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1048 298 PANTHER - 25 297 - -
Alju01g1048 298 NCBIfam HAD-IA family hydrolase 175 276 IPR006439 -
Alju01g1048 298 NCBIfam HAD-IA family hydrolase 194 274 IPR006439 -
Alju01g1048 298 Pfam Haloacid dehalogenase-like hydrolase 94 277 IPR041492 -
Alju01g1048 298 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 86 279 - -
Alju01g1048 298 SFLD Haloacid Dehalogenase 86 279 - -
Alju01g1048 298 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 193 206 IPR006439 -
Alju01g1048 298 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 241 261 IPR006439 -
Alju01g1048 298 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 85 96 IPR006439 -
Alju01g1048 298 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 223 239 IPR006439 -
Alju01g1048 298 NCBIfam HAD hydrolase, REG-2-like, family IA 86 279 IPR011949 -
Alju01g1048 298 CDD HAD_dREG-2_like 186 297 - -
Alju01g1048 298 Gene3D - 88 281 IPR023214 -
Alju01g1048 298 Gene3D - 101 174 IPR044924 -
Alju01g1048 298 SUPERFAMILY HAD-like 86 283 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1048 Alju-ChrAlju01 7863412 7866881 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1048 01 7863412 7866881 Alju01g1048 01 7863412 7866881 ECH