Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1004 ATGGATTCCTCATCTGCTTCCATTGATGGCTTTTCTGGATTCAAGGACAAGGAGTCAACGGTTGACCCCTTCTTGGTTGAAGCTCTTCAGAACTCTCGTCACCGTCTCACCATTTTGCGTATGGAACTTGATATTCAGAGGTTCCTGAACAACACTGATCAACAGCATTTTGAGTTCCAGCACTTTCCTTCTTCCTATCTTCGACTGGCAGCACATCGCGTTGCTCAACACTATGGTATGCAAACTATGATTCAAGATTATGGTGTAGATGGACAGGGAAGTAAAATAGTGGTGAGGAAGTTAGCAGAAAGCAGGTATCCCGCGGTCCGCTTGTCTGAAATATCTGCCAAACAGCCAGAAATTGATAAACCTGAGCAGAAAAAGATAGTCTTAAGGTCTAGACCTAATAAAAGCAATGCAAATGAAATCAATGAAGCAGGACTGAAAGGAAATCCTATGAGAAGTGTGGAAGAGAGGAAGGAGGAATATGACCGGGCACGAGCACGCATCTTCAGTGGCTCTGGAAGTTCTGATGCAAGTGATGCATTGTCCCAGGTCCCTGTGGATGGAAGAAATTGTAGTGTGGGTCAGGATGAGAATGAAGCTGACAAGAACCCTATGGCTGATTCAGAAAAATGCACGAGTGTCAGGGATATTGGTTCTACTCGTGTTGCCATATTGAGAGATAGGGAGAAGGATCGTAGTGATCCAGATTATGATCGTAGCTATGGAAGGTATGCTAGGAGTATTCCAAACTTTAACTTGGTGCCTTTTAGTCTTCACAAAGTTCCACCTTCATTTGCTCAATATGACAGTAATTTTAATCAGCTTGGGTTGAATCAGACGTCTGGAGATGTTACTTACCTGCAGTGGCCAAGTACTGCCATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTTCCAGGCTCCATTTGGTCAGCAGCCCCTGAGCTTTGATTATCCGCAGAACTACTAG 984 0.439 MDSSSASIDGFSGFKDKESTVDPFLVEALQNSRHRLTILRMELDIQRFLNNTDQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMIQDYGVDGQGSKIVVRKLAESRYPAVRLSEISAKQPEIDKPEQKKIVLRSRPNKSNANEINEAGLKGNPMRSVEERKEEYDRARARIFSGSGSSDASDALSQVPVDGRNCSVGQDENEADKNPMADSEKCTSVRDIGSTRVAILRDREKDRSDPDYDRSYGRYARSIPNFNLVPFSLHKVPPSFAQYDSNFNQLGLNQTSGDVTYLQWPSTAMMYAHSYDQFRHAVFQAPFGQQPLSFDYPQNY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1004 327 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 18 322 - -
Alju01g1004 327 SMART R3H_4 19 101 IPR001374 GO:0003676
Alju01g1004 327 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Alju01g1004 327 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Alju01g1004 327 Gene3D - 13 136 IPR036867 GO:0003676
Alju01g1004 327 MobiDBLite consensus disorder prediction 152 168 - -
Alju01g1004 327 MobiDBLite consensus disorder prediction 196 211 - -
Alju01g1004 327 MobiDBLite consensus disorder prediction 134 215 - -
Alju01g1004 327 Pfam R3H domain 37 100 IPR001374 GO:0003676
Alju01g1004 327 SUPERFAMILY R3H domain 11 119 IPR036867 GO:0003676
Alju01g1004 327 CDD R3H_encore_like 34 100 - -
Alju01g1004 327 Pfam SUZ domain 126 174 IPR024771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1004 Alju-ChrAlju01 7506698 7509701 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1004 01 7506698 7509701 Alju01g1004 01 7506698 7509701 ECH