Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0937 ATGGAGTCGAGCATTCTGGAATCCATCGGCGTAGAGATAATCGGAGTGATGTCCCCGGTCTCCATCTGTATGTTCCTTGTTGTCCTCCTCGTCTATTCCCTCTCTGCCTCCAATCCCTTCTCTCCTGCTTCTGTCGATACCATTCGCACCGCTGCCAACCTCGTCTACGCCGAGAACCCTTCCGACTCTGCTTCCCAGAAGCTCGAAGGTGCTCTTCTCAATGCTTTGGTCTTTGTCATCTTAATCGCCATCGTCACTTTCCTCCTTGTCCTTCTTTACTATTATAACTTCACCAATTTCCTCAAGAACTACATGCGCTTCTCCGCCTTCTTCGTTCTTGGCACCATGGGCGGATCCATCTTCTTGACCGTCATTCAAAAGTTCTCTATTCCTGTTGATTCCGTTACCTGTTTTCTTCTGCTTTTCAACTTCACTGTCGTCGGTGTTCTCTCCATGTTTTCGGGCGGGATCCCCATTTTGCTGAGGCAAACCTACATGGTTTGTTTAGGGATTATTGTGGCGGCCTGGTTCACGAAATTGCCCGAGTGGACCACTTGGGTTTTGCTAGTCGCATTGGCTGTGTATGATTTGGTGGCTGTATTGGCTCCCGGTGGCCCGCTTAAGCTGTTGGTCGATTTGGCCTCAACTAGGGATGAAGAGCTCCCCGCCTTGGTGTACGAGGCTCGACCTACGGTCGCTCGAACTGGGAATCGCGGAGCCTCGTCTTTAGGGCTTTTGGTCGCTGGAGTTTCAGATTCTTCGTCAATCGAGCTTCAAGCGGTGTCGAGGGACAACGTCAATAGAAATGAGAACGCGGGTCGCAGTAATGCCGACTATTCTGCGGTGACCTTAGGGGATTTTCAGAATGAAGAGGCTCATAGTGACAGAGACGATGGGGAGAGGTCGCCACTGGTGGGTCATGCACGGGAAAGGCATTCATCAAGTAGTGATTCGTCGCAGTATTCTACGGTTATCAGTCCATTCAGGCAAGATCAGCAATTTAATGGCAGGGACCATGAAATTGTTGGTGAGGAAACGTCTCCCCTTGTAGAAATGATGGAAATGGGCAATGAAGGAATGCAGACGAGGGTTGGTGGTGTGGAGATTGCGGATAGGGGTATTAAACTTGGACTTGGAGACTTTGTTTTCTACAGTGTCCTTGTGGGCAGAGCTGCAATGTATGACCTTATGACAGTGTATGCTTGTTACCTTGCAATTATATCAGGACTAGGTTGCACTCTAATTTTGTTGTCAGTGTGCCGTCGAGCTCTGCCTGCACTTCCTATTTCTATCGCCCTGGGTGTCATTTTTTATTTCTTGACACGATTATTAATGGAGCCCTTCATTGTTGGGGCAGCCTCAAATTTAATGATGTTTTGA 1380 0.4877 MESSILESIGVEIIGVMSPVSICMFLVVLLVYSLSASNPFSPASVDTIRTAANLVYAENPSDSASQKLEGALLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYMRFSAFFVLGTMGGSIFLTVIQKFSIPVDSVTCFLLLFNFTVVGVLSMFSGGIPILLRQTYMVCLGIIVAAWFTKLPEWTTWVLLVALAVYDLVAVLAPGGPLKLLVDLASTRDEELPALVYEARPTVARTGNRGASSLGLLVAGVSDSSSIELQAVSRDNVNRNENAGRSNADYSAVTLGDFQNEEAHSDRDDGERSPLVGHARERHSSSSDSSQYSTVISPFRQDQQFNGRDHEIVGEETSPLVEMMEMGNEGMQTRVGGVEIADRGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRRALPALPISIALGVIFYFLTRLLMEPFIVGAASNLMMF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0937 459 PANTHER PRESENILIN 2 459 IPR001108 GO:0004190|GO:0016020|GO:0016485
Alju01g0937 459 SMART psh_8 69 445 IPR006639 GO:0004190|GO:0016020
Alju01g0937 459 Gene3D Presenilin 355 450 IPR042524 -
Alju01g0937 459 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016020|GO:0016485
Alju01g0937 459 PRINTS Presenilin family signature 196 213 IPR001108 GO:0004190|GO:0016020|GO:0016485
Alju01g0937 459 PRINTS Presenilin family signature 179 186 IPR001108 GO:0004190|GO:0016020|GO:0016485
Alju01g0937 459 MobiDBLite consensus disorder prediction 289 322 - -
Alju01g0937 459 FunFam Presenilin 351 450 - -
Alju01g0937 459 MobiDBLite consensus disorder prediction 289 314 - -
Alju01g0937 459 Pfam Presenilin 10 449 IPR001108 GO:0004190|GO:0016020|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0937 Alju-ChrAlju01 6944068 6945447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0937 1 459 Miscellaneous Gene Families AT1G08700 65.962 0.0 572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0937 01 6944068 6945447 Alju01g0937 01 6944068 6945447 ECH