Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0899 ATGGCAAAAACGCCATTTCATGATCCAAATATTACGAGGCCCCAGGATGTGTACAAGATAGTAGTTGACAATTCAAACCGACCTTTTGAGCATGTCTGGATGGAGAAGAGGGATGATGGTCAGAAGATTCACCCTTTGGTGAAACTCTCTGCCTTAGATTTTGTTGATAAAGATTGTGGGGATATTGAGCCAATAAAGCCTCCCTCGATTGATTGCACCCCTTTCAAGATAGTGGAGGAAGTCAAGGATTTGATGGAGCTGGCTGCCAAGCTGGGTGCTGTTCAAGAATTTGCGGTGGATCTCGAACATAATCATTATCGTTCTTTTCAAGGACTGACTTGCTTAATGCAAATCTCAACCAGGACTGAAGATTTCGTGATAGACACTCTGAAGCTGCGTGTTTATGTTGGGCCTTATCTAAGGGAGCTTTTCAAAGATCCTACCAAGAGAAAGGTTATGCACGGAGCAGATGGAGATGTACGGTGGCTTCAAAGGGATTTTGGCATTTACATTTGTAATCTGTTTGACACTTGCCAGGCCTCAAGAGTATTAGAATTGGAAAGAAATAGTTTGGAGTATCTTCTACATCACTACTGTGGGGTTACTGCAGACAAACATTACCAGAAAGCAGATTGGAGACTACGTCCTCTTCCTGATGAGATGCTTAGGTCTCCAAAAATAGTCAAATGGATAGTTCAGGTGTTTGAGGACATAAAGGTCAGAATATGGTTATTCTGATATGCCAGAGAAGATACCCACTATCTGCTGTATATATATGATTTAATGAGAAAGAAGTTATTTGAGTTGTCCAAAGACCCTCAAAATTCTGATAATCCTCTGCTGAAGGTGTACGAGCTCGGTTATGGCGTCTGCATGCAGCTATATGAGAAAGAGCTTTGGACTGGAAACTCCTTCCTAAACATACATGGGTTGGAAGGGGCTGGTTTTAATGCTCTGCAATTGGCTGTTGTTTCAGGCCTTTATGGATGGCGGGATTTTGTTGCTCGCACAGTGGATGAGAGCACTGGCTATGTAATGCCAAATAAAACTCTTCTGAAAATTGCTAAGCACGTGCCTGTCACAGTAGGCGAACTTAAAAGGGTGATAAAGTCAAAGCACCCATATGTTGAGTGCAACTATGACAACATTGTCAACATCATTTTAAAATCTCGGCAAAATGCTTATGCCTTTGAAGCAGGTGCACAAGAATTGGAAAGGGGACGTGTCACAGCTAAAAAGGGTACTCTTCAGCATCAAAATCAATCTGGACAACTTAAATTTGAGTCATGTAGTTCTACTTCGGAATTTCCTCAAGGCAGTCTCAATATTTCACAACAGAACAGGGGAGCTAATACTGGCATTTCCTCTACTGCAAAGGGAAACGAAGAGATCAAGCTAGAGCAGATTGAAACTCACATGTCCCAAAAACGTGCGAACGATCCAAGGAGTATGAGATGCAACGACCAAGAAAACACAAATCAGGTCAAGTTTGAAGACGATGCAGAGAAAATGCGTCTTCCTCATCAGTGTGACTGA 1536 0.4219 MAKTPFHDPNITRPQDVYKIVVDNSNRPFEHVWMEKRDDGQKIHPLVKLSALDFVDKDCGDIEPIKPPSIDCTPFKIVEEVKDLMELAAKLGAVQEFAVDLEHNHYRSFQGLTCLMQISTRTEDFVIDTLKLRVYVGPYLRELFKDPTKRKVMHGADGDVRWLQRDFGIYICNLFDTCQASRVLELERNSLEYLLHHYCGVTADKHYQKADWRLRPLPDEMLRSPKIVKWIVQVFEDIKVRIWLFXYAREDTHYLLYIYDLMRKKLFELSKDPQNSDNPLLKVYELGYGVCMQLYEKELWTGNSFLNIHGLEGAGFNALQLAVVSGLYGWRDFVARTVDESTGYVMPNKTLLKIAKHVPVTVGELKRVIKSKHPYVECNYDNIVNIILKSRQNAYAFEAGAQELERGRVTAKKGTLQHQNQSGQLKFESCSSTSEFPQGSLNISQQNRGANTGISSTAKGNEEIKLEQIETHMSQKRANDPRSMRCNDQENTNQVKFEDDAEKMRLPHQCD 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0899 511 Gene3D HRDC domain 306 397 IPR044876 -
Alju01g0899 511 MobiDBLite consensus disorder prediction 492 511 - -
Alju01g0899 511 MobiDBLite consensus disorder prediction 463 484 - -
Alju01g0899 511 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 6 223 IPR045092 GO:0000175|GO:0000467
Alju01g0899 511 MobiDBLite consensus disorder prediction 414 511 - -
Alju01g0899 511 CDD Rrp6p_like_exo 71 284 - -
Alju01g0899 511 Gene3D - 3 305 IPR036397 GO:0003676
Alju01g0899 511 Pfam HRDC domain 320 386 IPR002121 GO:0003676
Alju01g0899 511 Pfam 3'-5' exonuclease 76 266 IPR002562 GO:0003676|GO:0006139|GO:0008408
Alju01g0899 511 SUPERFAMILY Ribonuclease H-like 11 270 IPR012337 -
Alju01g0899 511 SMART 35exoneu6 75 267 IPR002562 GO:0003676|GO:0006139|GO:0008408
Alju01g0899 511 MobiDBLite consensus disorder prediction 414 462 - -
Alju01g0899 511 SUPERFAMILY HRDC-like 315 392 IPR010997 GO:0000166|GO:0044237
Alju01g0899 511 ProSiteProfiles HRDC domain profile. 317 397 IPR002121 GO:0003676
Alju01g0899 511 FunFam Putative exosome component 10 304 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0899 Alju-ChrAlju01 6672819 6677895 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0899 01 6672819 6677895 Alju01g0899 01 6672819 6677895 ECH