Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0892 ATGCGCAGAGAATCATTCCCCATCCCAAAGCCACCAACCGCGCACCAATTCGTCATTATAAGAGGCAGTGAAGGGGAACCCCGTCGGTGTTGTATAGCAAAACGAATTGTCGTTTGCTCGATTCGTTTTACACCTGGCAACCTCACGAAGGAGAAGAGGGATAATGTTACTTTCTCGGCAGCCACCTCTCTCTGCTTCTACCACTGCCTCTTCCCAGAAGCGAGAACTGGTCTCCATTCACCCGAAAGAACAATGGCATCCCACATTGTCGGATATCCTCGCATGGGCCCCAAGAGAGAGCTCAAGTTTGCTCTGGAGTCTTTCTGGGATGGGAAGAGCAGCGCTGAAGATTTGAAGAAGGTTTCTGTTGATCTCAGGGCATCAATCTGGAAGCAAATGGCTGATGCTGGTATCAAGTACATCCCCAGCAACACATTTTCTTTCTACGATCAGGTGCTTGATGCTACTGCCCTTCTTGGTGCTGTTCCGCCGAGATATGGTTGGACTGGTGGGGAGATTGGATTTGATACCTACTTCTCCATGGCCAGAGGTAATGCGTCAGTACCTGCTATGGAGATGACCAAATGGTTCGACACCAACTATCACTATATTGTCCCTGAATTGGGACCTGATGTACACTTCTCTTACTCTTCTCACAAGGCTGTGGACGAGTACAAGGAAGCCAAAGCTCTTGGAGTAGATACGGTTCCAGTTCTGATCGGTCCTGTCTCGTACTTGTTGCTCTCCAAACCTGCGAAGGGTGTTGAGAAAACCTTTTCTCTCCTCTCTCTCCTTCCAAAAATCCTTGCTATTTACAAGGAAGTTATAGCTGATCTTAAGGCAGCCGGTGCTTCATGGATCCAGTTTGATGAACCAACCCTTGTTTTAGATCTTGAATCTCACAAGCTCCAAGCATTTACTGAAGCATACTCAGAGCTTGAATCTTCTTTATCTGGATTGAATGTGCTGATTGAGACCTACTTTGCTGATATTCCTGCTGATACTTACAAGACCCTCACTTCTCTCAAGAGTGTCACAGCTTATGGATTTGATCTTGTCCGTGGAACTCAGACCCTCAATTTGATCAAGGCTGGGTTTCCCAGTGGAAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCTAATGATCTTGCTGCTTCTCTAAGTTTACTCCAGGATCTTGAGGGCATTGTCGGCAAAGACAAACTTGTTGTCTCCACCTCCTGCTCGCTTCTTCACACTGCTGTTGATCTTGCAAATGAGACCAAACTTGATGATGAAATCAAGTCATGGCTGGCTTTTGCCGCCCAGAAAGTTGTTGAAGTTAATGCATTGGCCAAGGCATTGTCTGGTGCAAAACACGAGGAGTTCCACTCTGCTAATGCCGTAGCTCATGCTTCAAGGAAGTCCTCTCCAAGAGTGGTCAATGAGGCTGTTCAGAAAGCTGTTGCTGCATTGAAGGGTTCTGACCACCGCCGTGCCACTAATGTCAGTGCCAGACTGGATGCTCAACAAAAGAAGCTTAACCTGCCAATCCTCCCAACCACTACTATTGGATCCTTCCCTCAGACTGCAGAGCTGAGGAGGGTACGCCGTGAATTCAAAGCTAAAAAGATCTCCGAGGAAGAGTACGTTAATTTCATTAGAGAAGAAATCCGCAAAGTTGTTGAACTCCAAGAAGAACTTGATATTGATGTACTGGTGCATGGAGAACCGGAGAGAAACGACATGGTTGAGTACTTTGGTGAGCAGATGTCTGGCATTGCCTTCACTGCTAATGGGTGGGTGCAATCTTATGGATCTCGCTGTGTGAAGCCACCAATCATCTATGGTGATGTAAGCCGCCCAAAAGCTATGACTGTTTTCTGGTCAGCTATGGCTCAGAGCATGACCAAGCGCCCAATGAAGGGAATGCTTACCGGTCCCGTCACCATTCTGAACTGGTCCTTTGTTAGAGTCGACCAGCCTAGATCTGAGACCACCTTTCAGATTGCCTTGGCCATTAAGGAGGAAGTAGAAGATCTTGAGAAGGCCGGTATCAGCGTGATCCAAATTGACGAGGCTGCTTTGAGAGAGGGATTGCCTCTGAGGAAGTCAGAGCAAGCTCAGTACTTGGACTGGGCTGTCCACGCCTTCAGGATCACCAACGTTGGTGTGAAGGACACCACTCAGATCCACACCCACATGTGCTATTCCAACTTCAACGACATCATCCACTCAATCATTGACATGGATGCTGATGTGATCACCATTGAGAACTCCCGTTCCGATGAGAAGCTTCTCTCAGTGTTCCGTGAAGGAGTGAAGTACGGTGCCGGAATTGGCCCCGGTGTGTATGACATTCACTCTCCCAGGATCCCACCAACAGAGGAAATTGCCGATAGGATTAACAAGATGCTCGCAGTGCTGGAGAAGAACGTCTTGTGGGTCAACCCTGATTGTGGGCTCAAGACTCGCAAATACACTGAGGTGAAGCCTGCCCTCACCAACATGGTTGCTGCCGCCAAACAAATCCGCAATGAGCTCGCCTCTGCTAAGTGA 2550 0.482 MRRESFPIPKPPTAHQFVIIRGSEGEPRRCCIAKRIVVCSIRFTPGNLTKEKRDNVTFSAATSLCFYHCLFPEARTGLHSPERTMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVSVDLRASIWKQMADAGIKYIPSNTFSFYDQVLDATALLGAVPPRYGWTGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPDVHFSYSSHKAVDEYKEAKALGVDTVPVLIGPVSYLLLSKPAKGVEKTFSLLSLLPKILAIYKEVIADLKAAGASWIQFDEPTLVLDLESHKLQAFTEAYSELESSLSGLNVLIETYFADIPADTYKTLTSLKSVTAYGFDLVRGTQTLNLIKAGFPSGKYLFAGVVDGRNIWANDLAASLSLLQDLEGIVGKDKLVVSTSCSLLHTAVDLANETKLDDEIKSWLAFAAQKVVEVNALAKALSGAKHEEFHSANAVAHASRKSSPRVVNEAVQKAVAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTAELRRVRREFKAKKISEEEYVNFIREEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQMSGIAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSAMAQSMTKRPMKGMLTGPVTILNWSFVRVDQPRSETTFQIALAIKEEVEDLEKAGISVIQIDEAALREGLPLRKSEQAQYLDWAVHAFRITNVGVKDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNVLWVNPDCGLKTRKYTEVKPALTNMVAAAKQIRNELASAK 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0892 849 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 85 844 IPR006276 GO:0003871|GO:0008270|GO:0009086
Alju01g0892 849 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 89 484 - -
Alju01g0892 849 Gene3D - 474 842 IPR038071 -
Alju01g0892 849 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 85 849 - -
Alju01g0892 849 CDD CIMS_N_terminal_like 87 451 - -
Alju01g0892 849 Pfam Cobalamin-independent synthase, N-terminal domain 87 399 IPR013215 GO:0003871|GO:0008270|GO:0008652
Alju01g0892 849 Pfam Cobalamin-independent synthase, Catalytic domain 516 839 IPR002629 GO:0003871|GO:0008270|GO:0009086
Alju01g0892 849 SUPERFAMILY UROD/MetE-like 87 479 IPR038071 -
Alju01g0892 849 Gene3D - 89 609 IPR038071 -
Alju01g0892 849 CDD CIMS_C_terminal_like 517 839 IPR002629 GO:0003871|GO:0008270|GO:0009086
Alju01g0892 849 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 732 838 - -
Alju01g0892 849 NCBIfam 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 90 844 IPR006276 GO:0003871|GO:0008270|GO:0009086
Alju01g0892 849 SUPERFAMILY UROD/MetE-like 481 843 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0892 Alju-ChrAlju01 6610366 6616961 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0892 01 6610366 6616961 Alju01g0892 01 6610366 6616961 ECH